Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0223
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 191 4e-49
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 191 4e-49
Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 45 7e-05
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical ... 31 1.2
U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 191 bits (466), Expect = 4e-49
Identities = 87/162 (53%), Positives = 119/162 (73%), Gaps = 2/162 (1%)
Frame = +3
Query: 3 VPSNPDDIYLGSGASDVIKSVLTLFVEDVGGKPPAVMVPIPQYPLFSGTLSELGVRQVDY 182
+P N +D+ L GAS+ I++VL LF+ K VM+PIPQYPL+S T+ E G+ QV Y
Sbjct: 156 IPCNSEDVCLSGGASESIRNVLKLFINHNNAKKVGVMIPIPQYPLYSATIEEFGLGQVGY 215
Query: 183 YLDEEHDWALQILELERSWREGQYDSNVRALVVINPGNPTGQVLTRANIEQIIKFAYERN 362
YL E +W++ ELERS+ + + ++R L +INPGNPTGQ L+R NIE IIKFA ++N
Sbjct: 216 YLSESSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETIIKFAQKKN 275
Query: 363 LFILADEVYQENIVSK--PFHSFKKVMFEMGAPYSRMELASF 482
LF++ADEVYQ+N+ ++ FHSFKKV+ EMG PY++MELASF
Sbjct: 276 LFLMADEVYQDNVYAQGSQFHSFKKVLVEMGEPYNKMELASF 317
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 509 EXGLRSGYVELLHLQPSVQKT 571
E G+R GYVE L+L P V +T
Sbjct: 327 ECGMRGGYVEFLNLDPEVTRT 347
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 191 bits (466), Expect = 4e-49
Identities = 87/162 (53%), Positives = 119/162 (73%), Gaps = 2/162 (1%)
Frame = +3
Query: 3 VPSNPDDIYLGSGASDVIKSVLTLFVEDVGGKPPAVMVPIPQYPLFSGTLSELGVRQVDY 182
+P N +D+ L GAS+ I++VL LF+ K VM+PIPQYPL+S T+ E G+ QV Y
Sbjct: 156 IPCNSEDVCLSGGASESIRNVLKLFINHNNAKKVGVMIPIPQYPLYSATIEEFGLGQVGY 215
Query: 183 YLDEEHDWALQILELERSWREGQYDSNVRALVVINPGNPTGQVLTRANIEQIIKFAYERN 362
YL E +W++ ELERS+ + + ++R L +INPGNPTGQ L+R NIE IIKFA ++N
Sbjct: 216 YLSESSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETIIKFAQKKN 275
Query: 363 LFILADEVYQENIVSK--PFHSFKKVMFEMGAPYSRMELASF 482
LF++ADEVYQ+N+ ++ FHSFKKV+ EMG PY++MELASF
Sbjct: 276 LFLMADEVYQDNVYAQGSQFHSFKKVLVEMGEPYNKMELASF 317
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +2
Query: 509 EXGLRSGYVELLHLQPSVQKTFNIMRSVMQCPSVLG 616
E G+R GYVE L+L P V F M S C +VLG
Sbjct: 327 ECGMRGGYVEFLNLDPEVYVLFKKMISAKLCSTVLG 362
>Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical
protein F42D1.2 protein.
Length = 464
Score = 74.9 bits (176), Expect = 6e-14
Identities = 40/124 (32%), Positives = 68/124 (54%)
Frame = +3
Query: 18 DDIYLGSGASDVIKSVLTLFVEDVGGKPPAVMVPIPQYPLFSGTLSELGVRQVDYYLDEE 197
DD+ L SG S ++ + +E V ++VP P +PL+S + Y +D
Sbjct: 139 DDVVLASGCSHALQ----MAIEAVANAGENILVPHPGFPLYSTLCRPHNIVDKPYKIDMT 194
Query: 198 HDWALQILELERSWREGQYDSNVRALVVINPGNPTGQVLTRANIEQIIKFAYERNLFILA 377
+ + ++ S+ D N +A++V NPGNPTG V T+ ++E+I+ FA++ L I+A
Sbjct: 195 GE----DVRIDLSYMATIIDDNTKAIIVNNPGNPTGGVFTKEHLEEILAFAHQYKLIIIA 250
Query: 378 DEVY 389
DE+Y
Sbjct: 251 DEIY 254
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +3
Query: 243 EGQYDSNVRALVVINPGNPTGQVLTRANIEQIIKFAYERNLFILADEVYQENIVSK 410
E + + + LV+ NP NPTG++ +R +E++ + A + NL ++ADEVY+ ++ K
Sbjct: 169 ESKINEKTKMLVINNPHNPTGKLFSRHELEKLAEIAKKHNLIVIADEVYEFHVWDK 224
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +3
Query: 243 EGQYDSNVRALVVINPGNPTGQVLTRANIEQIIKFAYERNLFILADEVYQENIVSK 410
E + + + LV+ NP NPTG++ +R +E++ + A + NL ++ADEVY+ ++ K
Sbjct: 186 ESKINEKTKMLVINNPHNPTGKLFSRHELEKLAEIAKKHNLIVIADEVYEFHVWDK 241
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/57 (35%), Positives = 37/57 (64%)
Frame = +3
Query: 243 EGQYDSNVRALVVINPGNPTGQVLTRANIEQIIKFAYERNLFILADEVYQENIVSKP 413
E + + + +V+ NP NPTG++ +R ++ I + A +L ++ADEVY+ + VS+P
Sbjct: 169 EKKINKRTKMIVINNPHNPTGKLFSREELQHIAELARNYDLIVVADEVYEFH-VSQP 224
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/104 (22%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 132 PLFSGTLSELGVRQVDYYLDEEHDWA-----LQILELERSWREGQYDSNVRALVVINPGN 296
P+++GT+S + + + E D + +++ E E + R+ ++ V ++++NP N
Sbjct: 3226 PIYTGTISNVQEKAQCQVVCVETDLSNPRLDVKMYEAELN-RQIALENTVSGVIIVNPHN 3284
Query: 297 PTGQVLTRANIEQIIKFAYERNLFILADEVYQENIVSKPFHSFK 428
P G + + +A +NL ++ DEV+ ++ K F+
Sbjct: 3285 PLGVTFPPEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFR 3328
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/104 (22%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 132 PLFSGTLSELGVRQVDYYLDEEHDWA-----LQILELERSWREGQYDSNVRALVVINPGN 296
P+++GT+S + + + E D + +++ E E + R+ ++ V ++++NP N
Sbjct: 3226 PIYTGTISNVQEKAQCQVVCVETDLSNPRLDVKMYEAELN-RQIALENTVSGVIIVNPHN 3284
Query: 297 PTGQVLTRANIEQIIKFAYERNLFILADEVYQENIVSKPFHSFK 428
P G + + +A +NL ++ DEV+ ++ K F+
Sbjct: 3285 PLGVTFPPEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFR 3328
>AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical
protein C49A9.8 protein.
Length = 544
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 186 LDEEHDWALQILELERSWREGQYDSNVRALVVI 284
LD+E++ A IL ++RSWR S+ R +V I
Sbjct: 223 LDQEYEMAKDILGIQRSWRVSNIFSHSRNIVFI 255
>U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical
protein C06A8.6 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1
Query: 455 WCTHFEHYLFKG--MKRLAH-DVL--LVYFVSQNEQVTLVSKFDDLFNIRA 318
W TH EH+ F+ +K++ + D L L + + Q+T V D L N+ +
Sbjct: 52 WLTHVEHFSFRWNLIKKIENLDCLTTLTHLEFYDNQITKVENLDSLVNLES 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,272,198
Number of Sequences: 27780
Number of extensions: 352908
Number of successful extensions: 803
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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