BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0222 (758 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621... 81 1e-15 11_06_0257 + 21746643-21748091 32 0.57 08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 31 1.3 03_01_0112 + 902459-902770,903275-903280 30 1.7 09_04_0652 - 19227686-19227926,19229368-19232294 30 2.3 05_07_0183 + 28251548-28252009,28252172-28252594 29 4.0 03_02_0505 + 8981856-8982879,8983014-8983129,8985407-8985994,898... 29 4.0 11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 29 5.3 11_02_0149 - 8801675-8804332 29 5.3 10_08_0415 - 17761594-17762382 29 5.3 04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 29 5.3 02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 29 5.3 06_01_0845 - 6430419-6431195 28 7.0 03_05_1061 + 30037069-30037074,30037638-30037715,30038687-300387... 28 7.0 10_08_0048 - 14441540-14441620,14442044-14442111,14442275-144424... 28 9.3 08_01_0621 - 5426210-5427787 28 9.3 >08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106, 6214498-6214594,6214760-6214862,6214973-6215103, 6215285-6215462,6215528-6215715,6215945-6216154, 6216231-6216578,6216660-6216786,6217304-6217455 Length = 579 Score = 80.6 bits (190), Expect = 1e-15 Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = +2 Query: 137 ALRNAGLTVQDVSDITRAPEMLGGRVKTLHPAVHAGILS*LSDSDQ-EDMKRQKYEMISV 313 +L AG+ V V IT PEML GRVKTLHP+VH GIL+ + + V Sbjct: 81 SLEAAGVNVTKVEQITNFPEMLDGRVKTLHPSVHGGILARRDQEHHLKALNEHGIGTFDV 140 Query: 314 VVCNLYHFVQTVSKPDVTVADAVENIDIGGVTLLRA 421 VV NLY F V+ ++ D +ENIDIGG T++RA Sbjct: 141 VVVNLYPFYNKVTSGVISFEDGIENIDIGGPTMIRA 176 Score = 36.3 bits (80), Expect = 0.026 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = +1 Query: 31 KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTAT 135 K AL+S+SDKT L L L G +I++GGTA+ Sbjct: 46 KQALISLSDKTDLAYLGNGLQALGFSIISTGGTAS 80 >11_06_0257 + 21746643-21748091 Length = 482 Score = 31.9 bits (69), Expect = 0.57 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -2 Query: 199 HLRCSRDVRHILNCEAGVPKRPWRYRHWQST 107 HL C++ R+++N +G WR+R W S+ Sbjct: 300 HLPCAQPCRYLVNTPSGELLHVWRFRQWVSS 330 >08_02_1143 + 24659105-24659386,24660171-24660272,24661259-24661521, 24661775-24661874,24662080-24662238,24662327-24663147, 24663299-24663618,24665831-24667398 Length = 1204 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -2 Query: 220 SFHPTSEHLRCSR-DVRHILNCEAGVPKRPWRYRHWQST 107 S HP S H S+ D I +C A V WR RH +T Sbjct: 791 SHHPFSAHAHYSQPDFPTIASCRAAVASSKWRRRHPSTT 829 >03_01_0112 + 902459-902770,903275-903280 Length = 105 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -2 Query: 208 TSEHLRCSRDVRHILNCEAGVPKRPWRYR 122 T+ LR RD RH+ CE+GVPK R++ Sbjct: 58 TATRLRL-RDGRHLAYCESGVPKEEARFK 85 >09_04_0652 - 19227686-19227926,19229368-19232294 Length = 1055 Score = 29.9 bits (64), Expect = 2.3 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = +1 Query: 82 KSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGDARRSGENFTSSGTCW 243 ++++E LI + SE+ P S C S + ++G + GTCW Sbjct: 427 QTVAEGNNSLIPGSESGQVVSEKEPEPSECSESCASVPNLEQTGTSNVEDGTCW 480 >05_07_0183 + 28251548-28252009,28252172-28252594 Length = 294 Score = 29.1 bits (62), Expect = 4.0 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +1 Query: 121 GGTATGASERRPHSSRCVGHHESTGDARRSGENFTSSG 234 GG +G +RR ++ CV E G +GE +G Sbjct: 92 GGLISGLRDRRSNALTCVSMQEGDGQGEEAGEGDVGAG 129 >03_02_0505 + 8981856-8982879,8983014-8983129,8985407-8985994, 8986091-8986192 Length = 609 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Frame = +3 Query: 63 GSTLVSKEPVGMWPAVDCQWRYR----HGRFGTPASQFKMCR 176 G + ++PVG WPA C YR RFG AS +M R Sbjct: 129 GHVWLDEQPVGPWPAATCP-PYRVSADASRFGDRASASRMAR 169 >11_06_0349 + 22565405-22566279,22567774-22569772,22570360-22570478, 22570835-22571117 Length = 1091 Score = 28.7 bits (61), Expect = 5.3 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = +1 Query: 31 KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHH 183 KL D LLS + LS C L+ +A + TG E SS+ H Sbjct: 773 KLVKFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLESSLSSSQAAPEH 823 >11_02_0149 - 8801675-8804332 Length = 885 Score = 28.7 bits (61), Expect = 5.3 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 QNMASNGKLALLSVSDKTGLLSLAKSLSECGLQL 111 QN+ S G +ALL+ ++ T + S + S +E G QL Sbjct: 555 QNVTSMGVMALLATAEPTSMPSSSTSSNETGSQL 588 >10_08_0415 - 17761594-17762382 Length = 262 Score = 28.7 bits (61), Expect = 5.3 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Frame = +1 Query: 4 AXQNMASNGKLALLSV-SDKTGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGH 180 A MA++GK S S K L+ K L G + S G R +S C G Sbjct: 78 AVDAMAASGKKVDASNNSGKPRWLAATKGLDHNGGVGVFSLGAWRYKGVARQSASMCCGQ 137 Query: 181 HESTGDARRSGENFTSSGTCWDLKLIIR 264 + + GE + +G C D+ I+R Sbjct: 138 LDHSSGMHDDGEVWLRAGPCSDIAGIVR 165 >04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 Length = 486 Score = 28.7 bits (61), Expect = 5.3 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 15 HGVKWKTSSSQRFRQDGSTLVSKEPVGMWPAVDCQWRYRHGRF 143 HG ++KT+++ G ++ PA C+W RH RF Sbjct: 344 HGDEYKTAAALTSTGAGMRAAARRCSYSCPAEGCRWNRRHPRF 386 >02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659, 3769736-3769990,3770763-3770934,3772260-3772910, 3773659-3774045,3774123-3774155,3774239-3774307, 3774388-3774463,3775135-3775223,3775442-3775615, 3775693-3775821 Length = 907 Score = 28.7 bits (61), Expect = 5.3 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = -2 Query: 391 DVLDRVRHGHVRLRYRLDEM-VXVTDHH 311 DVL +R GHV L Y L E DHH Sbjct: 687 DVLKLIRDGHVELHYTLKEFSTPHADHH 714 >06_01_0845 - 6430419-6431195 Length = 258 Score = 28.3 bits (60), Expect = 7.0 Identities = 19/60 (31%), Positives = 23/60 (38%) Frame = +1 Query: 64 GLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGDARRSGENFTSSGTCW 243 GL +L + ASG AT + P + C G E GD R E G CW Sbjct: 15 GLQTLIAPDAAAAASRSASGYVATRTLKASPRAVGCPGGGE--GDGEREEEEEGEEGGCW 72 >03_05_1061 + 30037069-30037074,30037638-30037715,30038687-30038745, 30038823-30038907,30039206-30039294,30039384-30039446, 30039635-30039707,30040033-30040086,30040224-30040265, 30040609-30040674 Length = 204 Score = 28.3 bits (60), Expect = 7.0 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +1 Query: 436 DRVTVVC-DPADYDAVVKEIKENKHL-RRLWAQGQXLALKAFTSYFRTMTLPYRDYFRXQ 609 DR C DP+ D K+ K++KH +R + Q L L S+F + + YF Q Sbjct: 92 DRKLKHCLDPSSQDEHKKKEKKSKHKSKRAANEAQLLNLMCEISFFTQAPIDQKSYFPEQ 151 Query: 610 LLA 618 A Sbjct: 152 FSA 154 >10_08_0048 - 14441540-14441620,14442044-14442111,14442275-14442493, 14442506-14444508,14447541-14448410,14448533-14448576, 14449920-14450093 Length = 1152 Score = 27.9 bits (59), Expect = 9.3 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = +1 Query: 61 TGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGDAR 204 T L A + S C + + TA S RR H VG + GD + Sbjct: 147 TSTLQTASATSPCSGRTTGAAATAVPFSRRRRHGGGGVGRGPADGDGQ 194 >08_01_0621 - 5426210-5427787 Length = 525 Score = 27.9 bits (59), Expect = 9.3 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 480 YSIVVGRVTDDGDPVVVLGXARRRVTPP 397 YS+ GR+ DDGD + + RR V+ P Sbjct: 140 YSLAEGRMCDDGDVRLPMACRRRYVSSP 167 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,790,497 Number of Sequences: 37544 Number of extensions: 365862 Number of successful extensions: 1248 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1247 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2027850416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -