Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0220
         (272 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 240 RSPQPRFGXPWRAAGADGERGHXEYERYHP 151
           RSP+ R+G      G  G   + +Y+R +P
Sbjct: 43  RSPRARYGGGGGGGGGGGRGRNQQYDRENP 72


>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
           protein T01E8.3 protein.
          Length = 1299

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 234 PQPRFGXPWRAAGADGER 181
           PQP    PW +A AD E+
Sbjct: 656 PQPHLNQPWFSATADKEK 673


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,253,370
Number of Sequences: 27780
Number of extensions: 52546
Number of successful extensions: 92
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)