Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0218
         (552 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5RGN7 Cluster: Novel EGF domain containing protein; n=...    35   1.1  
UniRef50_Q248I7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.4  
UniRef50_Q9FLJ6 Cluster: Arabidopsis thaliana genomic DNA, chrom...    33   3.3  
UniRef50_Q0UN20 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q8LDG4 Cluster: Receptor-like protein kinase-like prote...    32   7.7  

>UniRef50_Q5RGN7 Cluster: Novel EGF domain containing protein; n=8;
            cellular organisms|Rep: Novel EGF domain containing
            protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 8327

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 11   CSVLSILSQLHFVYNFS-NGTLSVCVLNDRHTQFTKFEGVFDFSLSTCSSRDRCDI 175
            CS L   +  +  ++ S N T  VC LN+   Q  K EG+F +   TC + D CD+
Sbjct: 1508 CSCLDGFTAANSSFSVSINNTCEVCSLNETRYQ-CKCEGLFVWPNDTCHAYDACDV 1562



 Score = 33.5 bits (73), Expect = 3.3
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 62   NGTLSVCVLNDRHTQFTKFEGVFDFSLSTCSSRDRCDI 175
            N T  VC LN+   Q  K EG+F +   TC + D CD+
Sbjct: 968  NNTCEVCSLNETRYQ-CKCEGLFVWPNDTCHAYDACDV 1004



 Score = 32.7 bits (71), Expect = 5.8
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 11   CSVLSILSQLHFVYNFSNGT-LSVCVLNDRHTQFTKFEGVFDFSLSTCSSRDRCDI 175
            CS LS  +        SN    +VC LN+   Q  K EG+F +   TC + D CD+
Sbjct: 4775 CSCLSAFTVTDRNQRVSNSNPCNVCSLNETRYQ-CKCEGLFAWPNDTCHAYDACDV 4829


>UniRef50_Q248I7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 834

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +2

Query: 38  LHFVYNFSNGTLSVCVLNDRH-TQFTK 115
           L F YNFS G++S+CV+N+ H  QF K
Sbjct: 77  LQFRYNFSIGSISICVINNEHQKQFKK 103


>UniRef50_Q9FLJ6 Cluster: Arabidopsis thaliana genomic DNA,
           chromosome 5, P1 clone:MFB13; n=3; core
           eudicotyledons|Rep: Arabidopsis thaliana genomic DNA,
           chromosome 5, P1 clone:MFB13 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 487

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -1

Query: 294 NRNPLLASALTIRRTCFLCSLFYID--DHSLMTEARFLRAPEISHRSLDEHVESEKSNTP 121
           NR   L S  T + T + CS   +D  + +L    R + +P      L+E++     +  
Sbjct: 9   NRFTYLTS--TAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPS 66

Query: 120 SNFVNCVWRSFKTQTLNVPFEKLYTKWSCERIESTLH 10
           SN V  V  S K +T      + ++ WSC+ + S+LH
Sbjct: 67  SNLVTQVIESCKNETSPRRLLRFFS-WSCKSLGSSLH 102


>UniRef50_Q0UN20 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 672

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -1

Query: 249 CFLCSLFYIDDHSLMTEARFLRAPEISHR---SLDEHVESEKSNTPSNFVNC 103
           CF  +  +++    MT+A     P +SH    SL+    SE S  PSNF NC
Sbjct: 250 CFSNTHGFMNSSDTMTQASSAPTPVLSHSNYTSLESAFTSEPSPGPSNFSNC 301


>UniRef50_Q8LDG4 Cluster: Receptor-like protein kinase-like protein;
           n=2; Arabidopsis thaliana|Rep: Receptor-like protein
           kinase-like protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 452

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -3

Query: 277 RIGVDDPPDMFPVFTFLHRRSLAHDGGAVSTGARDIASIPRRACRK*KVKHTFKLCKLCM 98
           R+ V++PPD   V   L    LA D    STG R + +IP+    +   +  F+L  +C 
Sbjct: 391 RVPVNEPPDSDVVVVDL----LAADDDDASTGVRRVVNIPKLQIHR---ERNFRLSSICS 443

Query: 97  AIV 89
           +I+
Sbjct: 444 SII 446


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,211,898
Number of Sequences: 1657284
Number of extensions: 9620091
Number of successful extensions: 24804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24799
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)