Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0217
         (557 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p pro...   127   1e-29
BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p pro...   127   1e-29
AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-P...   127   1e-29
AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p pro...    29   4.3  
AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-P...    29   4.3  
X61945-1|CAA43951.1|  112|Drosophila melanogaster ng-2 protein.        28   7.4  
X52118-1|CAA36363.1|  107|Drosophila melanogaster nested protein.      28   7.4  
AY113385-1|AAM29390.1|  112|Drosophila melanogaster RE05239p pro...    28   7.4  
AL024484-4|CAA19667.1|  107|Drosophila melanogaster EG:96G10.5,F...    28   7.4  
AL024484-2|CAA19671.1|  112|Drosophila melanogaster EG:96G10.4,F...    28   7.4  
AE014298-500|AAF45856.1|  107|Drosophila melanogaster CG10781-PA...    28   7.4  
AE014298-498|AAF45854.1|  112|Drosophila melanogaster CG14266-PA...    28   7.4  
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         28   9.8  
M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein ( D.me...    28   9.8  
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    28   9.8  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    28   9.8  

>BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p
           protein.
          Length = 590

 Score =  127 bits (306), Expect = 1e-29
 Identities = 63/83 (75%), Positives = 70/83 (84%)
 Frame = +1

Query: 4   SXGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEML 183
           S  K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT+LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 184 GGRVKTLHPAVHAGILARLSDSD 252
           GGRVKTLHPAVHAGIL+R +DSD
Sbjct: 62  GGRVKTLHPAVHAGILSRTTDSD 84



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +3

Query: 258 DMKRQKYXXXSVXVCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRA 401
           DM++Q +    + VCNLYPF  TV+KPDVT+ADAVENIDIGGVTLLRA
Sbjct: 87  DMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGVTLLRA 134



 Score = 37.5 bits (83), Expect = 0.012
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 407 KNHDRVTVVCXPADYDAVVKEIK 475
           KNH RVTVVC   DYD V+ E+K
Sbjct: 137 KNHQRVTVVCEAVDYDRVLSELK 159



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 508 RQRLALKAFTHTSDYD 555
           RQ LALKAFTHT+ YD
Sbjct: 169 RQALALKAFTHTATYD 184


>BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p
           protein.
          Length = 590

 Score =  127 bits (306), Expect = 1e-29
 Identities = 63/83 (75%), Positives = 70/83 (84%)
 Frame = +1

Query: 4   SXGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEML 183
           S  K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT+LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 184 GGRVKTLHPAVHAGILARLSDSD 252
           GGRVKTLHPAVHAGIL+R +DSD
Sbjct: 62  GGRVKTLHPAVHAGILSRTTDSD 84



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +3

Query: 258 DMKRQKYXXXSVXVCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRA 401
           DM++Q +    + VCNLYPF  TV+KPDVT+ADAVENIDIGGVTLLRA
Sbjct: 87  DMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGVTLLRA 134



 Score = 37.5 bits (83), Expect = 0.012
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 407 KNHDRVTVVCXPADYDAVVKEIK 475
           KNH RVTVVC   DYD V+ E+K
Sbjct: 137 KNHQRVTVVCEAVDYDRVLSELK 159



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 508 RQRLALKAFTHTSDYD 555
           RQ LALKAFTHT+ YD
Sbjct: 169 RQALALKAFTHTATYD 184


>AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-PA
           protein.
          Length = 590

 Score =  127 bits (306), Expect = 1e-29
 Identities = 63/83 (75%), Positives = 70/83 (84%)
 Frame = +1

Query: 4   SXGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEML 183
           S  K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT+LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 184 GGRVKTLHPAVHAGILARLSDSD 252
           GGRVKTLHPAVHAGIL+R +DSD
Sbjct: 62  GGRVKTLHPAVHAGILSRTTDSD 84



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +3

Query: 258 DMKRQKYXXXSVXVCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRA 401
           DM++Q +    + VCNLYPF  TV+KPDVT+ADAVENIDIGGVTLLRA
Sbjct: 87  DMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGVTLLRA 134



 Score = 37.5 bits (83), Expect = 0.012
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 407 KNHDRVTVVCXPADYDAVVKEIK 475
           KNH RVTVVC   DYD V+ E+K
Sbjct: 137 KNHQRVTVVCEAVDYDRVLSELK 159



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 508 RQRLALKAFTHTSDYD 555
           RQ LALKAFTHT+ YD
Sbjct: 169 RQALALKAFTHTATYD 184


>AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 361 TASATVTSGLDTVWTNGYRLQTXTLXXSYF 272
           T +AT T  +   WTNGY L T TL  S F
Sbjct: 73  TGNATFTREVPCKWTNGYHLDT-TLLLSVF 101


>AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-PA
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 361 TASATVTSGLDTVWTNGYRLQTXTLXXSYF 272
           T +AT T  +   WTNGY L T TL  S F
Sbjct: 73  TGNATFTREVPCKWTNGYHLDT-TLLLSVF 101


>X61945-1|CAA43951.1|  112|Drosophila melanogaster ng-2 protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>X52118-1|CAA36363.1|  107|Drosophila melanogaster nested protein.
          Length = 107

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>AY113385-1|AAM29390.1|  112|Drosophila melanogaster RE05239p
           protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>AL024484-4|CAA19667.1|  107|Drosophila melanogaster
           EG:96G10.5,FBgn0002933;ng1 protein.
          Length = 107

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>AL024484-2|CAA19671.1|  112|Drosophila melanogaster
           EG:96G10.4,FBgn0010294;ng2 protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>AE014298-500|AAF45856.1|  107|Drosophila melanogaster CG10781-PA
           protein.
          Length = 107

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>AE014298-498|AAF45854.1|  112|Drosophila melanogaster CG14266-PA
           protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324 TVSKPDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*SK-KSKRTNIIRRL 500
           + S    T A A         T   A   TTT SPSS ++  T+   K K KR   +R++
Sbjct: 32  SASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKI 91


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 425  TVVCXPADYDAVVKEIKENKHHQTTLGTG 511
            T  C  AD DA  +   + K HQ  LGTG
Sbjct: 1296 TPACLEADPDAEAEAPADEKQHQGILGTG 1324


>M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein (
           D.melanogaster pecanexgene, exons 1 (partial) and 2. ).
          Length = 1938

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 425 TVVCXPADYDAVVKEIKENKHHQTTLGTG 511
           T  C  AD DA  +   + K HQ  LGTG
Sbjct: 751 TPACLEADPDAEAEAPADEKQHQGILGTG 779


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
            EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 425  TVVCXPADYDAVVKEIKENKHHQTTLGTG 511
            T  C  AD DA  +   + K HQ  LGTG
Sbjct: 1739 TPACLEADPDAEAEAPADEKQHQGILGTG 1767


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
            protein.
          Length = 3433

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 425  TVVCXPADYDAVVKEIKENKHHQTTLGTG 511
            T  C  AD DA  +   + K HQ  LGTG
Sbjct: 1750 TPACLEADPDAEAEAPADEKQHQGILGTG 1778


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,192,634
Number of Sequences: 53049
Number of extensions: 416035
Number of successful extensions: 1574
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)