Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0216
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -3

Query: 549  WSFSMNSQQSCRWGGTAXXXRFADYIDDASEGF 451
            W +    Q  C  G  +    FAD++ +  E F
Sbjct: 1944 WEYPKCWQVDCNKGPASDKSAFADFVKELHEAF 1976


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 357 SSDHCHGRYXRLSPWATCTRLW 422
           S++HC   Y       +CTR W
Sbjct: 95  STEHCDWLYGIFGHETSCTRYW 116


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = -1

Query: 419 ESSTGCPRTKPXVPXMAMVRTVXSPKCWATSSTRRGDRFCTSRAFRIGGRLSS 261
           E++T CP  K  V     V++  +   W T+ +   D   T+   +IG ++S+
Sbjct: 122 ENTTNCPEQKNTVTVTFTVQSDDTTLNWGTNESYNLD--LTTTGNQIGVQISA 172


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 KNRCSQCRXQEGL 189
           +NRC  CR Q+ L
Sbjct: 135 RNRCQYCRYQKCL 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,862
Number of Sequences: 336
Number of extensions: 2548
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)