Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0215
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 5e-44
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 5e-44
SB_56| Best HMM Match : Actin (HMM E-Value=0) 174 5e-44
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 174 5e-44
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 5e-44
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 79 2e-15
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 5e-10
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 34 0.091
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.48
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.5
SB_49798| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 29 2.6
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 28 5.9
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 27 7.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 27 7.9
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 27 7.9
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 27 7.9
SB_3123| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.9
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 27 7.9
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 27 7.9
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.9
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 27 7.9
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 174 bits (423), Expect = 5e-44
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 450
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 451 EKMTQIMFETFNTPAMYVA 507
EKMTQIMFETFN+PAMYVA
Sbjct: 118 EKMTQIMFETFNSPAMYVA 136
Score = 103 bits (247), Expect = 1e-22
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXK 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG K
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 174 bits (423), Expect = 5e-44
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 450
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116
Query: 451 EKMTQIMFETFNTPAMYVA 507
EKMTQIMFETFN+PAMYVA
Sbjct: 117 EKMTQIMFETFNSPAMYVA 135
Score = 100 bits (240), Expect = 7e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +2
Query: 107 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXK 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTGIV
Sbjct: 137 QAVLSLYASGRTTGIV 152
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 174 bits (423), Expect = 5e-44
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 450
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116
Query: 451 EKMTQIMFETFNTPAMYVA 507
EKMTQIMFETFN+PAMYVA
Sbjct: 117 EKMTQIMFETFNSPAMYVA 135
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 107 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXK 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTGIV
Sbjct: 137 QAVLSLYASGRTTGIV 152
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 174 bits (423), Expect = 5e-44
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 450
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 451 EKMTQIMFETFNTPAMYVA 507
EKMTQIMFETFN+PAMYVA
Sbjct: 118 EKMTQIMFETFNSPAMYVA 136
Score = 107 bits (258), Expect = 5e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXK 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG K
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 174 bits (423), Expect = 5e-44
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 450
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 451 EKMTQIMFETFNTPAMYVA 507
EKMTQIMFETFN+PAMYVA
Sbjct: 118 EKMTQIMFETFNSPAMYVA 136
Score = 103 bits (247), Expect = 1e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXK 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG K
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 101 bits (243), Expect = 3e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +2
Query: 107 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXK 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 372
EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 445 NREKMTQIMFETFNTPAMYVA 507
N + M +IMFETFN+PAMYVA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVA 98
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTGIV
Sbjct: 100 QAVLSLYASGRTTGIV 115
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 447
EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP N
Sbjct: 60 EASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKN 119
Query: 448 REKMTQIMFETFNTPAMYVA 507
REKM ++MFE + +Y+A
Sbjct: 120 REKMIEVMFENYQFEGVYIA 139
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 119 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 217
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +1
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATK 513
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA +
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 226
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAV++LYASGRTTG V
Sbjct: 2182 QAVMALYASGRTTGTV 2197
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 5e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 310 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 489
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 490 PAMYV 504
PA ++
Sbjct: 63 PAFFL 67
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 60.9 bits (141), Expect = 7e-10
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 400 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA++++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFIS 161
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYA+GRTTG+V
Sbjct: 163 QAVLSLYATGRTTGVV 178
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 226
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 95 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 241
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 271 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 417
EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 289 EAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 223 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 107
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 33.9 bits (74), Expect = 0.091
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIV 557
QAVLSLYASGRTTG+V
Sbjct: 16 QAVLSLYASGRTTGVV 31
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 466 IMFETFNTPAMYVA 507
IMFE FN+PA+YVA
Sbjct: 1 IMFEAFNSPAVYVA 14
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = -3
Query: 315 DGVFEGQDTSFALCLISYIRAXXXXXXXXP*WRGLPTIEGNTARGASSPAKPALHIPEPL 136
DG F+L L + IR W GNT R PAKPAL++P P
Sbjct: 41 DGEMRAILNDFSLPLDAKIRHYNRVSNQYLKWLQQLKDGGNTNRRTRIPAKPALNLPSPP 100
Query: 135 STT 127
S T
Sbjct: 101 SKT 103
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 301 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 453
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 198 GNTARGASSPAKPALHIPEPLSTT 127
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 198 GNTARGASSPAKPALHIPEPLSTT 127
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGL 155
H++ K++ SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 310 PIEHGIVTNWDDMEKIWHHTFYNE 381
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 113 EVAALVVDNGSGMCKAGFAGDDAPRAV 193
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_49798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 418 TEAPLNPKANREKMTQIMFETFNTPAMYVATK 513
T +P +P N +K T FET NTP + +AT+
Sbjct: 444 TASPRHPTNNTDKATH-KFETRNTPTLSIATE 474
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 508 TKPCSRCTRPVVPP 549
T+PCS CT+P +PP
Sbjct: 221 TEPCSLCTKPALPP 234
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 198 GNTARGASSPAKPALHIPEPLSTT 127
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 198 GNTARGASSPAKPALHIPEPLSTT 127
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
H++ + +H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 213 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 103
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
H++ + +H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_3123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 442 ANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVS 555
A++ K FE F T A++ +P +R VVPP+S
Sbjct: 2 ADQIKSNLEAFEHFGTLAIHAGQEPEKWTSRAVVPPIS 39
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
H++ + +H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
H++ + +H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
H++ + +H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 271 HLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
H++ + +H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 289 LFCSVPHLLHKSLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 146
L C ++ + SH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,010,823
Number of Sequences: 59808
Number of extensions: 435185
Number of successful extensions: 1343
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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