Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0213
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.4  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 237 VREPTRVTTYL*SGAYRSTSPLXIS 163
           V+EP   TT   SGA  ++ P+ I+
Sbjct: 100 VQEPGSSTTSATSGAVMASPPMPIT 124


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 336 ELEXSLFAGRPPC 298
           E   SL+ G PPC
Sbjct: 354 ERPWSLYCGEPPC 366


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 263 PANVVLRHECGNRPESRHISDPAHIAQLLRXQSACSDCLQV 141
           P+N   RH    R  +RH +   +     R   A S C Q+
Sbjct: 265 PSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRCGQL 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,647
Number of Sequences: 336
Number of extensions: 1790
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)