Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0213
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257     29   2.9  
08_01_0693 + 6131714-6132531,6133038-6135027                           27   6.6  

>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
          Length = 421

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 322 PVCWAPSXCPGSKD 281
           PVCWAP   PGS D
Sbjct: 241 PVCWAPPSAPGSYD 254


>08_01_0693 + 6131714-6132531,6133038-6135027
          Length = 935

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +2

Query: 92  RHWPVE--LNPGPGVGSKSPGDNHYR-LIXNGEVERYAPDQRYVVTLVGSRTHDVVQRLR 262
           R W  E  +   PG   +  G +++  L+  G ++   P+Q Y   + G R HD++  L 
Sbjct: 447 RQWIAEGFVRSSPGQDLEDVGQSYFNELVNRGLIQ---PEQNYDREVTGCRVHDMMLDLI 503

Query: 263 ASK 271
            SK
Sbjct: 504 LSK 506


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,571,592
Number of Sequences: 37544
Number of extensions: 237183
Number of successful extensions: 512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)