Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0213
         (511 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens ...    38   0.015
AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.       38   0.015
AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.     38   0.015

>AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
           Rattus norvegicus f-spondin mRNA. ).
          Length = 807

 Score = 38.3 bits (85), Expect = 0.015
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = +1

Query: 256 FAGFKXILDPLNPDTXRAPSKQGXFQLXIXTXTXFDEEXTNSVVEADDLPKTEXQVMXKA 435
           F GF  I    N +  +     G FQ+     T F      +V E+    +T  QV   A
Sbjct: 90  FRGFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIA 149

Query: 436 PPXGXXCVLXKAXV 477
           PP G  CV+ KA +
Sbjct: 150 PPAGTGCVILKASI 163


>AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.
          Length = 807

 Score = 38.3 bits (85), Expect = 0.015
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = +1

Query: 256 FAGFKXILDPLNPDTXRAPSKQGXFQLXIXTXTXFDEEXTNSVVEADDLPKTEXQVMXKA 435
           F GF  I    N +  +     G FQ+     T F      +V E+    +T  QV   A
Sbjct: 90  FRGFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIA 149

Query: 436 PPXGXXCVLXKAXV 477
           PP G  CV+ KA +
Sbjct: 150 PPAGTGCVILKASI 163


>AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.
          Length = 724

 Score = 38.3 bits (85), Expect = 0.015
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = +1

Query: 256 FAGFKXILDPLNPDTXRAPSKQGXFQLXIXTXTXFDEEXTNSVVEADDLPKTEXQVMXKA 435
           F GF  I    N +  +     G FQ+     T F      +V E+    +T  QV   A
Sbjct: 7   FRGFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIA 66

Query: 436 PPXGXXCVLXKAXV 477
           PP G  CV+ KA +
Sbjct: 67  PPAGTGCVILKASI 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,481,765
Number of Sequences: 237096
Number of extensions: 1266258
Number of successful extensions: 2967
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)