Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0212
(549 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_57127| Best HMM Match : MGS (HMM E-Value=0.25) 61 7e-10
SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20) 33 0.15
SB_51115| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_36310| Best HMM Match : DEAD (HMM E-Value=1.4) 31 0.62
SB_23457| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 29 1.9
SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_7068| Best HMM Match : ResIII (HMM E-Value=0.29) 29 2.5
SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72) 29 3.3
SB_44615| Best HMM Match : Ribosomal_L25p (HMM E-Value=3.5) 29 3.3
SB_25687| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 28 4.4
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 5.8
SB_55881| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_45980| Best HMM Match : C1_3 (HMM E-Value=4.6) 28 5.8
SB_52159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_34782| Best HMM Match : zf-CHY (HMM E-Value=0.36) 27 7.6
SB_20152| Best HMM Match : CRAL_TRIO_N (HMM E-Value=2.6) 27 7.6
SB_38317| Best HMM Match : bZIP_2 (HMM E-Value=5.1e-14) 27 7.6
SB_7073| Best HMM Match : ResIII (HMM E-Value=0.083) 27 7.6
>SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 111 bits (266), Expect = 5e-25
Identities = 53/75 (70%), Positives = 62/75 (82%)
Frame = +2
Query: 29 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGG 208
G LALLSVS+K GL+ AK L + G +L+ASGGTA +RNAG+ V+DVS+IT APEMLGG
Sbjct: 33 GSLALLSVSNKKGLVEFAKQLHDLGFRLVASGGTANAIRNAGIPVRDVSEITGAPEMLGG 92
Query: 209 RVKTLHPAVHAGILA 253
RVKTLHPAVH GILA
Sbjct: 93 RVKTLHPAVHGGILA 107
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM +Q +E I VVVC L PFV V+K V V++AVE IDIGGVT LRA
Sbjct: 116 DMAKQGFEYIRVVVCNLYPFVNTVAKEGVIVSEAVEQIDIGGVTLLRA 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAVVKXIKENK 503
AK H+RVTVVCDP DY+ V+ + EN+
Sbjct: 165 AKNHERVTVVCDPEDYNKVLSEMTENE 191
>SB_57127| Best HMM Match : MGS (HMM E-Value=0.25)
Length = 79
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM +Q +E I VVVC L PFV V+K V V++AVE IDIGGVT LRA
Sbjct: 13 DMAKQGFEYIRVVVCNLYPFVNTVAKEGVIVSEAVEQIDIGGVTLLRA 60
Score = 34.3 bits (75), Expect = 0.067
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYD 473
AK H+RVTVVCDP DY+
Sbjct: 62 AKNHERVTVVCDPEDYN 78
>SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20)
Length = 918
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDPR+ V++ + + G+R E + ++ T +P D++L
Sbjct: 839 YPRLPATIRFDPDPRSRIVIAKQGRPVPVPGKRGE---KVDAYKGTVVEVPLDAVL 891
>SB_51115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1088
Score = 31.5 bits (68), Expect = 0.47
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Frame = -2
Query: 401 PPMSMFSTASATVTSGLDTXWTXGXRXQTTTLIISYF*RFMSXWSESDNELRYQRVPLDV 222
PP +F+ A+ T S + W+ R ++ Y R+ S S +D +R + L++
Sbjct: 551 PPQQLFA-ANLTSQSTITLTWSPVPRGHVNGVLRGYILRY-SMTSSADIRVRKPKT-LEM 607
Query: 221 KFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTA-GHIPTDSLLTRVDPFCPK 51
+ P+ T +ELSG +S + W+++ T+ G P ++ CPK
Sbjct: 608 RIPPEK----------TRIELSGLQSYSLWKFQLLAYTSVGEGPETEVIVAETCRCPK 655
>SB_36310| Best HMM Match : DEAD (HMM E-Value=1.4)
Length = 1042
Score = 31.1 bits (67), Expect = 0.62
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLLTRVD 66
Y R+P ++F PDP + + + G+R E Y + T +P D++L R+
Sbjct: 944 YPRLPATIRFDPDPSVAHRYRKKGRPVPVPGKRGEKVGAY---KGTVVEVPLDAVLNRLP 1000
Query: 65 PFCPK 51
P+
Sbjct: 1001 RHFPR 1005
>SB_23457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E R ++ST +P D++L
Sbjct: 305 YPRLPATIRFDPDPSVAHRYRKQGRPVPVPGKRGE---RVDEYKSTVVEVPLDAVL 357
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 248 RYQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLLTRV 69
+Y R+P ++F PDP + + + G+R E + ++ T +P D++L +
Sbjct: 703 KYPRLPATIRFDPDPSVAHRYRKQGRPVPVPGKRGE---KVDAYKGTVVEVPLDAVLNGL 759
Query: 68 DP 63
P
Sbjct: 760 PP 761
>SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 115 RQWRYRHGASERRPDSSRCVGHHESTGDARGSGENFTSSGTR 240
R+WR R +RR R E +GD GSGE TR
Sbjct: 190 RKWRQRRKWRQRRKWRQRRKWRREGSGDREGSGEEKEVGMTR 231
>SB_7068| Best HMM Match : ResIII (HMM E-Value=0.29)
Length = 1131
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDPR + + + G+R E + ++ T +P D++L
Sbjct: 1023 YPRLPATIRFDPDPRVAHRYRKQGRPVPVPGKRGE---KVDAYKGTVVEVPLDAVL 1075
>SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72)
Length = 1161
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHW 117
Y R+P ++F PDP + + + G+R E W+Y W
Sbjct: 957 YPRLPATIRFDPDPSFAHRYRKQGRPVPVPGKRGE-KWKYAGW 998
>SB_44615| Best HMM Match : Ribosomal_L25p (HMM E-Value=3.5)
Length = 582
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -2
Query: 269 SESDNELRYQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPT 90
SES Y R+P ++F PDP + + G+R E Y + T +P
Sbjct: 438 SESTTGKNYPRLPATIRFDPDPSVAHRYRKKGRPAPVPGKRGENVDAY---KGTVVEVPI 494
Query: 89 DSLL 78
D++L
Sbjct: 495 DAVL 498
>SB_25687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + + G+R E + ++ T +P D++L
Sbjct: 651 YPRLPATIRFDPDPSVAHLYRKQGRPVPVPGKRGE---KVDAYKGTVVEVPLDAVL 703
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E + ++ TA P D++L
Sbjct: 675 YPRLPATIRFDPDPSVAHRYRKQGRPVPVPGKRGE---KVDAYKGTAAEFPLDAVL 727
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E + ++ TA P D++L
Sbjct: 613 YPRLPATIRFDPDPSVAHRYRKQGRPVPVPGKRGE---KVDAYKGTAAEFPLDAVL 665
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E Y + T +P D++L
Sbjct: 604 YPRLPATIRFDPDPSVAHCYRKQGRPVPVPGKRGEKVVAY---KGTVVEVPLDAVL 656
>SB_55881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E ++ ++ T +P D++L
Sbjct: 676 YPRLPATIRFDPDPGVAHHYRKQGRPVPVPGKRGE---KFDAYKGTVVEVPLDAVL 728
>SB_45980| Best HMM Match : C1_3 (HMM E-Value=4.6)
Length = 771
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E + +R T +P D++L
Sbjct: 103 YTRLPATIRFDPDPSVAHRYRKQGRSVPVPGKRGE---KVDAYRGTVVDVPLDAVL 155
>SB_52159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP + + + G+R E Y + T ++P D++L
Sbjct: 17 YPRLPATIRFDPDPSVAHRYRKQWRSVPVPGKRGEKADAY---KGTVVYVPLDAVL 69
>SB_34782| Best HMM Match : zf-CHY (HMM E-Value=0.36)
Length = 967
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLL 78
Y R+P ++F PDP S + + G R E + ++ST +P D++L
Sbjct: 750 YPRLPATIRFDPDPSVSHRYRKQGRPVPVPGIRGE---KVDAYKSTVVEVPLDAVL 802
>SB_20152| Best HMM Match : CRAL_TRIO_N (HMM E-Value=2.6)
Length = 490
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -2
Query: 272 WSESDNELR-YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHI 96
W S++ + Y R+P ++F PDP + + + G+R E + ++ T +
Sbjct: 422 WRVSEHHRKNYPRLPATIRFDPDPSVAHRYRKQWRPVPVPGKRGE---KVDAYKGTVVEV 478
Query: 95 PTDSLL 78
P D++L
Sbjct: 479 PLDAVL 484
>SB_38317| Best HMM Match : bZIP_2 (HMM E-Value=5.1e-14)
Length = 561
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/60 (26%), Positives = 22/60 (36%)
Frame = +1
Query: 40 SSQRFGQNGSTLVSKESVGMWPAVDRQWRYRHGASERRPDSSRCVGHHESTGDARGSGEN 219
SS G + S WP + R +G S++ D S C H G + EN
Sbjct: 130 SSLSASWEGYRITSCNFQPQWPTGNLPPRQSNGHSDKPTDDSECEDHEAKRGKSNHETEN 189
>SB_7073| Best HMM Match : ResIII (HMM E-Value=0.083)
Length = 1105
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -2
Query: 245 YQRVPLDVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRYRHWRSTAGHIPTDSLLTRVD 66
Y R+P ++F PDP A+ + + G+R E + ++ T +P +L V
Sbjct: 934 YPRLPATIRFDPDPSAAHRYCKQGRPVPVPGKRGE---KVDAYKGTVVEVPLGVVLNGVP 990
Query: 65 P 63
P
Sbjct: 991 P 991
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.131 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,442
Number of Sequences: 59808
Number of extensions: 255153
Number of successful extensions: 864
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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