Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0212
(549 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 27 0.41
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 25 1.6
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 25 1.6
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 24 2.9
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 24 2.9
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 2.9
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 5.0
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 23 6.6
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 23 6.6
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 6.6
AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding pr... 23 8.8
AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative odorant-b... 23 8.8
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 27.1 bits (57), Expect = 0.41
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = -1
Query: 225 CKVFTRPPSISGALVMSDTS*TVRPAFRSXVAVPPLAINCRPHSDRLFANESRPVLSETL 46
C+V PP+++ + T+ T A S +NC+ + RLF + + V
Sbjct: 286 CEVAVEPPAMTTTTTTTTTTPTTATACPSTTEFNYKELNCQ-NCGRLFISNNGRVSCCRC 344
Query: 45 RRASFPFDAMF 13
++S PF F
Sbjct: 345 MKSSTPFGKFF 355
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.0 bits (52), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 162 TVRPAFRSXVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
TVR + RS VPP R+F+NE + E +F +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 208
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 25.0 bits (52), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 162 TVRPAFRSXVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
TVR + RS VPP R+F+NE + E +F +AM C
Sbjct: 165 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 214
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 24.2 bits (50), Expect = 2.9
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 162 TVRPAFRSXVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
TVR + RS VPP R+F NE + E +F +AM C
Sbjct: 389 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 438
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 24.2 bits (50), Expect = 2.9
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 162 TVRPAFRSXVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
TVR + RS VPP R+F NE + E +F +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 208
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.2 bits (50), Expect = 2.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 67 STLVSKESVGMWP-AVDRQWRYRHGASERRPDSSRCV 174
S + + +W A DRQW R AS +RP + R V
Sbjct: 787 SEAIIRYGAPIWAEATDRQWCQRMLASFQRPLAQRVV 823
Score = 23.4 bits (48), Expect = 5.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 162 TVRPAFRSXVAVPPLAINCRPHSDRLFANESRPVLSETLRRA 37
T RPA+ A+ L CR R A+ + P +S R+A
Sbjct: 290 TGRPAYWCTPAIEELENECRIAEQRQLASPTDPDISALDRQA 331
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.4 bits (48), Expect = 5.0
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -2
Query: 134 WRYRHWRSTAGHIPTDSLLTRVDPFCPKR*EELVFHLT 21
W+ R W +T T L+ + P+ +R + FH++
Sbjct: 859 WQ-REWSTTTSGSWTRRLIPNIQPWITRRHGNIEFHMS 895
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.0 bits (47), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 221 LHPAVHAGILAHYQ 262
LHPA H G+ +YQ
Sbjct: 188 LHPAYHTGLHHYYQ 201
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.0 bits (47), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 221 LHPAVHAGILAHYQ 262
LHPA H G+ +YQ
Sbjct: 188 LHPAYHTGLHHYYQ 201
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.0 bits (47), Expect = 6.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 173 THLELSGRRSEAPWRYRHWRSTAGHI 96
THLE +G S+ + +R RST I
Sbjct: 513 THLESTGGLSDPQYGFRKGRSTVDAI 538
>AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding
protein AgamOBP46 protein.
Length = 202
Score = 22.6 bits (46), Expect = 8.8
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 227 DVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRY 126
+ F D + V S CPT+L + +A W +
Sbjct: 158 EASFLVDCIHTTVFSDCPTNLRSTSTECDAIWNF 191
>AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative
odorant-binding protein OBPjj1 protein.
Length = 199
Score = 22.6 bits (46), Expect = 8.8
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 227 DVKFSPDPRASPVLS*CPTHLELSGRRSEAPWRY 126
+ F D + V S CPT+L + +A W +
Sbjct: 155 EASFLVDCIHTTVFSDCPTNLRSTSTECDAIWNF 188
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.317 0.131 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,753
Number of Sequences: 2352
Number of extensions: 7863
Number of successful extensions: 28
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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