Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0212
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89976-1|BAA21762.1| 592|Homo sapiens 5-aminoimidazole-4-carbox... 112 9e-25
D82348-1|BAA11559.1| 592|Homo sapiens 5-aminoimidazole-4-carbox... 112 9e-25
BC008879-1|AAH08879.1| 592|Homo sapiens 5-aminoimidazole-4-carb... 112 9e-25
AC073284-1|AAY24062.1| 592|Homo sapiens unknown protein. 112 9e-25
AB062403-1|BAB93490.1| 592|Homo sapiens 5-aminoimidazole-4-carb... 112 9e-25
U37436-1|AAA97405.1| 591|Homo sapiens AICAR formyltransferase/I... 107 2e-23
DQ101120-1|AAZ09125.1| 109|Homo sapiens immunoglobulin kappa li... 31 3.5
>D89976-1|BAA21762.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide ribonucleotide
transformylase protein.
Length = 592
Score = 112 bits (269), Expect = 9e-25
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 29 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGG 208
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA LR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 209 RVKTLHPAVHAGILA 253
RVKTLHPAVHAGILA
Sbjct: 64 RVKTLHPAVHAGILA 78
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM R + +I VV C L PFV V+ P VTV +AVE IDIGGVT LRA
Sbjct: 87 DMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGVTLLRA 134
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAV 479
AK H RVTVVC+P DY V
Sbjct: 136 AKNHARVTVVCEPEDYVVV 154
>D82348-1|BAA11559.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide-1-beta-D-ribonucl eotide
transformylase/inosinic protein.
Length = 592
Score = 112 bits (269), Expect = 9e-25
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 29 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGG 208
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA LR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 209 RVKTLHPAVHAGILA 253
RVKTLHPAVHAGILA
Sbjct: 64 RVKTLHPAVHAGILA 78
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM R + +I VV C L PFV V+ P VTV +AVE IDIGGVT LRA
Sbjct: 87 DMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGVTLLRA 134
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAV 479
AK H RVTVVC+P DY V
Sbjct: 136 AKNHARVTVVCEPEDYVVV 154
>BC008879-1|AAH08879.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide ribonucleotide
formyltransferase/IMP cyclohydrol protein.
Length = 592
Score = 112 bits (269), Expect = 9e-25
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 29 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGG 208
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA LR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 209 RVKTLHPAVHAGILA 253
RVKTLHPAVHAGILA
Sbjct: 64 RVKTLHPAVHAGILA 78
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM R + +I VV C L PFV V+ P VTV +AVE IDIGGVT LRA
Sbjct: 87 DMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGVTLLRA 134
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAV 479
AK H RVTVVC+P DY V
Sbjct: 136 AKNHARVTVVCEPEDYVVV 154
>AC073284-1|AAY24062.1| 592|Homo sapiens unknown protein.
Length = 592
Score = 112 bits (269), Expect = 9e-25
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 29 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGG 208
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA LR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 209 RVKTLHPAVHAGILA 253
RVKTLHPAVHAGILA
Sbjct: 64 RVKTLHPAVHAGILA 78
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM R + +I VV C L PFV V+ P VTV +AVE IDIGGVT LRA
Sbjct: 87 DMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGVTLLRA 134
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAV 479
AK H RVTVVC+P DY V
Sbjct: 136 AKNHARVTVVCEPEDYVVV 154
>AB062403-1|BAB93490.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide-1-bata-D-ribonucl eotid
transformylase/inosinica protein.
Length = 592
Score = 112 bits (269), Expect = 9e-25
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 29 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGG 208
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA LR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 209 RVKTLHPAVHAGILA 253
RVKTLHPAVHAGILA
Sbjct: 64 RVKTLHPAVHAGILA 78
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM R + +I VV C L PFV V+ P VTV +AVE IDIGGVT LRA
Sbjct: 87 DMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGVTLLRA 134
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAV 479
AK H RVTVVC+P DY V
Sbjct: 136 AKNHARVTVVCEPEDYVVV 154
>U37436-1|AAA97405.1| 591|Homo sapiens AICAR formyltransferase/IMP
cyclohydrolase bifunctional enzyme protein.
Length = 591
Score = 107 bits (258), Expect = 2e-23
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +2
Query: 38 ALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEMLGGRVK 217
AL SVSDKTGL+ A++L+ GL L+ASGGTA LR+AGL V+DVS++T PEMLGGRVK
Sbjct: 6 ALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGGRVK 65
Query: 218 TLHPAVHAGILA 253
TLHPAVHAGILA
Sbjct: 66 TLHPAVHAGILA 77
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +1
Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
DM R + +I VV C L PFV V+ P VTV +AVE IDIGGVT LRA
Sbjct: 86 DMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGVTLLRA 133
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 423 AKXHDRVTVVCDPADYDAV 479
AK H RVTVVC+P DY V
Sbjct: 135 AKNHARVTVVCEPEDYVVV 153
>DQ101120-1|AAZ09125.1| 109|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 109
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = -3
Query: 313 PRLSSRTSDVSCLPGQSLIMS*DTSVYRWM*SFHPTPEHLRCSRDVRHILNCQAGVPKXR 134
P + + +SC QSL+ S + W+ H P R V + N +GVP
Sbjct: 9 PVTLGQPASISCRSSQSLLHSDGNTYLNWL---HQRPGQSP-RRLVYKVSNRDSGVPDRF 64
Query: 133 GGTATGDQLQATF 95
GG+ +G TF
Sbjct: 65 GGSGSGTDFTLTF 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.131 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,611,490
Number of Sequences: 237096
Number of extensions: 1172322
Number of successful extensions: 6687
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6687
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -