Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0212
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p pro...   118   4e-27
BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p pro...   118   4e-27
AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-P...   118   4e-27

>BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p
           protein.
          Length = 590

 Score =  118 bits (285), Expect = 4e-27
 Identities = 59/77 (76%), Positives = 65/77 (84%)
 Frame = +2

Query: 23  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEML 202
           S+ K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 203 GGRVKTLHPAVHAGILA 253
           GGRVKTLHPAVHAGIL+
Sbjct: 62  GGRVKTLHPAVHAGILS 78



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +1

Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
           DM++Q +++I +VVC L PF   V+KPDVT+ADAVENIDIGGVT LRA
Sbjct: 87  DMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGVTLLRA 134



 Score = 35.1 bits (77), Expect = 0.063
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 423 AKXHDRVTVVCDPADYDAVVKXIK 494
           AK H RVTVVC+  DYD V+  +K
Sbjct: 136 AKNHQRVTVVCEAVDYDRVLSELK 159


>BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p
           protein.
          Length = 590

 Score =  118 bits (285), Expect = 4e-27
 Identities = 59/77 (76%), Positives = 65/77 (84%)
 Frame = +2

Query: 23  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEML 202
           S+ K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 203 GGRVKTLHPAVHAGILA 253
           GGRVKTLHPAVHAGIL+
Sbjct: 62  GGRVKTLHPAVHAGILS 78



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +1

Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
           DM++Q +++I +VVC L PF   V+KPDVT+ADAVENIDIGGVT LRA
Sbjct: 87  DMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGVTLLRA 134



 Score = 35.1 bits (77), Expect = 0.063
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 423 AKXHDRVTVVCDPADYDAVVKXIK 494
           AK H RVTVVC+  DYD V+  +K
Sbjct: 136 AKNHQRVTVVCEAVDYDRVLSELK 159


>AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-PA
           protein.
          Length = 590

 Score =  118 bits (285), Expect = 4e-27
 Identities = 59/77 (76%), Positives = 65/77 (84%)
 Frame = +2

Query: 23  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATXLRNAGLTVQDVSDITRAPEML 202
           S+ K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 203 GGRVKTLHPAVHAGILA 253
           GGRVKTLHPAVHAGIL+
Sbjct: 62  GGRVKTLHPAVHAGILS 78



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +1

Query: 277 DMKRQKYEMISVVVCXLXPFVXXVSKPDVTVADAVENIDIGGVTXLRA 420
           DM++Q +++I +VVC L PF   V+KPDVT+ADAVENIDIGGVT LRA
Sbjct: 87  DMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGVTLLRA 134



 Score = 35.1 bits (77), Expect = 0.063
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 423 AKXHDRVTVVCDPADYDAVVKXIK 494
           AK H RVTVVC+  DYD V+  +K
Sbjct: 136 AKNHQRVTVVCEAVDYDRVLSELK 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.131    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,569,687
Number of Sequences: 53049
Number of extensions: 369014
Number of successful extensions: 1079
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)