Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0211
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456375-1|CAG30261.1|  384|Homo sapiens Em:AP000355.2 protein.       116   6e-26
BC139843-1|AAI39844.2|  389|Homo sapiens UPB1 protein protein.        116   6e-26
BC131703-1|AAI31704.1|  384|Homo sapiens UPB1 protein protein.        116   6e-26
AF169559-1|AAF06739.1|  387|Homo sapiens beta-ureidopropionase p...   116   6e-26
AF163312-1|AAF06735.1|  384|Homo sapiens beta-ureidopropionase p...   116   6e-26
AB013885-1|BAA88634.1|  384|Homo sapiens beta-ureidopropionase p...   116   6e-26

>CR456375-1|CAG30261.1|  384|Homo sapiens Em:AP000355.2 protein.
          Length = 384

 Score =  116 bits (279), Expect = 6e-26
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG+VQ+ I +P + PV EQ  A+  ++K I++VA   GVNI CFQE W MPFAFCTREK 
Sbjct: 74  VGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKL 133

Query: 436 PWCEFAESAEDGPTTTFLRELA 501
           PW EFAESAEDGPTT F ++LA
Sbjct: 134 PWTEFAESAEDGPTTRFCQKLA 155



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 47  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 226
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 227 EQTRPPRIV 253
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>BC139843-1|AAI39844.2|  389|Homo sapiens UPB1 protein protein.
          Length = 389

 Score =  116 bits (279), Expect = 6e-26
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG+VQ+ I +P + PV EQ  A+  ++K I++VA   GVNI CFQE W MPFAFCTREK 
Sbjct: 74  VGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKL 133

Query: 436 PWCEFAESAEDGPTTTFLRELA 501
           PW EFAESAEDGPTT F ++LA
Sbjct: 134 PWTEFAESAEDGPTTRFCQKLA 155



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 47  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 226
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 227 EQTRPPRIV 253
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>BC131703-1|AAI31704.1|  384|Homo sapiens UPB1 protein protein.
          Length = 384

 Score =  116 bits (279), Expect = 6e-26
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG+VQ+ I +P + PV EQ  A+  ++K I++VA   GVNI CFQE W MPFAFCTREK 
Sbjct: 74  VGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKL 133

Query: 436 PWCEFAESAEDGPTTTFLRELA 501
           PW EFAESAEDGPTT F ++LA
Sbjct: 134 PWTEFAESAEDGPTTRFCQKLA 155



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 47  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 226
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 227 EQTRPPRIV 253
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>AF169559-1|AAF06739.1|  387|Homo sapiens beta-ureidopropionase
           protein.
          Length = 387

 Score =  116 bits (279), Expect = 6e-26
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG+VQ+ I +P + PV EQ  A+  ++K I++VA   GVNI CFQE W MPFAFCTREK 
Sbjct: 74  VGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKL 133

Query: 436 PWCEFAESAEDGPTTTFLRELA 501
           PW EFAESAEDGPTT F ++LA
Sbjct: 134 PWTEFAESAEDGPTTRFCQKLA 155



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 47  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 226
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 227 EQTRPPRIV 253
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>AF163312-1|AAF06735.1|  384|Homo sapiens beta-ureidopropionase
           protein.
          Length = 384

 Score =  116 bits (279), Expect = 6e-26
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG+VQ+ I +P + PV EQ  A+  ++K I++VA   GVNI CFQE W MPFAFCTREK 
Sbjct: 74  VGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKL 133

Query: 436 PWCEFAESAEDGPTTTFLRELA 501
           PW EFAESAEDGPTT F ++LA
Sbjct: 134 PWTEFAESAEDGPTTRFCQKLA 155



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 47  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 226
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 227 EQTRPPRIV 253
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>AB013885-1|BAA88634.1|  384|Homo sapiens beta-ureidopropionase
           protein.
          Length = 384

 Score =  116 bits (279), Expect = 6e-26
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG+VQ+ I +P + PV EQ  A+  ++K I++VA   GVNI CFQE W MPFAFCTREK 
Sbjct: 74  VGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKL 133

Query: 436 PWCEFAESAEDGPTTTFLRELA 501
           PW EFAESAEDGPTT F ++LA
Sbjct: 134 PWTEFAESAEDGPTTRFCQKLA 155



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 47  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 226
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 227 EQTRPPRIV 253
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,316,573
Number of Sequences: 237096
Number of extensions: 1435395
Number of successful extensions: 3320
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3314
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)