Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0211
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    93   1e-19
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    28   4.0  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    28   4.0  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    28   4.0  
Z81074-8|CAB03043.1|  413|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 93.1 bits (221), Expect = 1e-19
 Identities = 43/84 (51%), Positives = 53/84 (63%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+   QE W MPFAFCTRE+ 
Sbjct: 76  VAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFCTRERL 135

Query: 436 PWCEFAESAEDGPTTTFLRELAIK 507
           PW EFAES   GPTT FL +LA+K
Sbjct: 136 PWTEFAESVYTGPTTQFLSKLAVK 159



 Score = 27.1 bits (57), Expect = 9.1
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +2

Query: 59  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 232
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 233 TRPPRIVR 256
           TR PR+VR
Sbjct: 68  TRAPRLVR 75


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -2

Query: 494 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKXXMLTPSWPATS 348
           SR K+    +S+   +  HG + +V+ AK  F + ++   +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 411  EGHVPQLLETXDVNTLLAGNIDDSLDFIEN 322
            EGHVP ++ET    T+     DD  D  EN
Sbjct: 3091 EGHVPSVIETKTTTTVTREFYDDDQDEHEN 3120


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 411  EGHVPQLLETXDVNTLLAGNIDDSLDFIEN 322
            EGHVP ++ET    T+     DD  D  EN
Sbjct: 3091 EGHVPSVIETKTTTTVTREFYDDDQDEHEN 3120


>Z81074-8|CAB03043.1|  413|Caenorhabditis elegans Hypothetical
           protein F32B6.9 protein.
          Length = 413

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 473 GPSSADSANSHHGCFSLVQNAKGMFHNSW 387
           G  S     SHHGC SL ++ K   H SW
Sbjct: 388 GKGSIKDLESHHGCVSLKKDKK---HISW 413


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,957,623
Number of Sequences: 27780
Number of extensions: 223856
Number of successful extensions: 612
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)