Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0211
         (558 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g64370.1 68418.m08086 beta-ureidopropionase, putative / beta-...   109   9e-25
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei...    29   1.6  
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei...    29   1.6  
At5g24680.1 68418.m02917 expressed protein similar to unknown pr...    28   3.7  
At5g02880.1 68418.m00231 HECT-domain-containing protein / ubiqui...    28   4.9  
At4g24790.1 68417.m03550 expressed protein ; expression supporte...    27   6.4  

>At5g64370.1 68418.m08086 beta-ureidopropionase, putative /
           beta-alanine synthase, putative similar to beta-alanine
           synthase [Dictyostelium discoideum] GI:14334061;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 408

 Score =  109 bits (263), Expect = 9e-25
 Identities = 51/84 (60%), Positives = 64/84 (76%)
 Frame = +1

Query: 256 VGIVQHSIAVPTDRPVNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQ 435
           VG++Q+SIA+PT  P ++Q + IF+K+K IID AG  GVNI C QE W MPFAFCTRE++
Sbjct: 92  VGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAGVAGVNILCLQEAWTMPFAFCTRERR 151

Query: 436 PWCEFAESAEDGPTTTFLRELAIK 507
            WCEFAE   DG +T FL+ELA K
Sbjct: 152 -WCEFAEPV-DGESTKFLQELAKK 173


>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 294

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +1

Query: 301 VNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQP-WCEFAESAED-GP 474
           V   KK   +  K  I+ A  +G  +    E+WN P+   + +  P + E  ++  D  P
Sbjct: 97  VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPY---SNDSFPVYAEEIDAGGDASP 153

Query: 475 TTTFLRELA 501
           +T  L E++
Sbjct: 154 STAMLSEVS 162


>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 369

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +1

Query: 301 VNEQKKAIFNKVKTIIDVAGQEGVNIXCFQELWNMPFAFCTREKQP-WCEFAESAED-GP 474
           V   KK   +  K  I+ A  +G  +    E+WN P+   + +  P + E  ++  D  P
Sbjct: 97  VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPY---SNDSFPVYAEEIDAGGDASP 153

Query: 475 TTTFLRELA 501
           +T  L E++
Sbjct: 154 STAMLSEVS 162


>At5g24680.1 68418.m02917 expressed protein similar to unknown
           protein (pir||T38384)
          Length = 399

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 521 DHHCDLMASSRRKVVVGPSSADSANSHHGCFSLVQ-NAKGMFHN 393
           DHH  L  +S       PSS+ SA+S +   SLVQ   K  F++
Sbjct: 37  DHHLALQLASDDHSSDDPSSSSSASSSNNVASLVQLQTKSQFYS 80


>At5g02880.1 68418.m00231 HECT-domain-containing protein /
           ubiquitin-transferase family protein /
           armadillo/beta-catenin-like repeat-containing protein
           similar to SP|Q14669 Thyroid receptor interacting
           protein 12 (TRIP12) {Homo sapiens}; contains Pfam
           profiles PF00632: HECT-domain (ubiquitin-transferase),
           PF00514: Armadillo/beta-catenin-like repeat
          Length = 1502

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = -1

Query: 477 GRPVFS*FGKLAPRLLLPCAEREGHVPQLLETXDVNTLLAGNIDDSLDFIENXFLLLVDW 298
           G  V+  +G L+    L C  + G + +LL+  +++++LAG +      +    L + + 
Sbjct: 454 GANVYVSYGCLSAIHKLTCLSKSGDIVELLKNTNMSSVLAGILSRKDHHVIVVALQVAEV 513

Query: 297 TIGGHRDGMLN 265
            +  +RD  LN
Sbjct: 514 LLEKYRDTFLN 524


>At4g24790.1 68417.m03550 expressed protein ; expression supported
           by MPSS
          Length = 815

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 378 DVNTLLAGN-IDDSLDFIENXFLLLVDWTIGGHRDGMLNYSYLTILGGRVCSSL 220
           D++T LA   I++ +DF +     +   + G  RD  +    L++LG R+ +SL
Sbjct: 418 DISTKLAKICIEEGIDFDQGAVDFIASKSDGSLRDAEIMLDQLSLLGKRITTSL 471


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,476,136
Number of Sequences: 28952
Number of extensions: 217495
Number of successful extensions: 538
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)