Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0209
(557 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 188 2e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 188 2e-48
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 188 2e-48
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 186 7e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 186 9e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 186 9e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 186 9e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 186 1e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 186 1e-47
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 168 3e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 160 7e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 152 1e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 111 3e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 9e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 9e-17
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 8e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 1e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 51 5e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 1e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.074
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.4
At4g13350.2 68417.m02088 human Rev interacting-like protein-rela... 27 6.4
At4g13350.1 68417.m02087 human Rev interacting-like protein-rela... 27 6.4
At4g01535.1 68417.m00199 hypothetical protein 27 6.4
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 6.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 90/101 (89%), Positives = 91/101 (90%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFNTPAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (458), Expect = 2e-48
Identities = 90/101 (89%), Positives = 90/101 (89%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFNTPAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (458), Expect = 2e-48
Identities = 90/101 (89%), Positives = 90/101 (89%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFNTPAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (454), Expect = 7e-48
Identities = 89/101 (88%), Positives = 90/101 (89%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFN PAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 186 bits (453), Expect = 9e-48
Identities = 87/101 (86%), Positives = 91/101 (90%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+AP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFN+PAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 101 bits (241), Expect = 4e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 186 bits (453), Expect = 9e-48
Identities = 87/101 (86%), Positives = 91/101 (90%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+AP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFN+PAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 101 bits (241), Expect = 4e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 186 bits (453), Expect = 9e-48
Identities = 87/101 (86%), Positives = 91/101 (90%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+AP EHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFN+PAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 101 bits (241), Expect = 4e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 88/101 (87%), Positives = 89/101 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP EHP+LLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFN PAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 88/101 (87%), Positives = 89/101 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP EHP+LLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETFN PAM VAIQAVLSL S T VLD GDG
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 168 bits (408), Expect = 3e-42
Identities = 76/101 (75%), Positives = 86/101 (85%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ P EHP+LLTEAPLNPK NRE
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNRE 120
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFE+F P+M + IQAVLSL S T VLD GDG
Sbjct: 121 KMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDG 161
Score = 99 bits (238), Expect = 1e-21
Identities = 43/59 (72%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDE +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 160 bits (388), Expect = 7e-40
Identities = 73/101 (72%), Positives = 85/101 (84%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANRE 434
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAP EHPVLLTEAPLNPKA+RE
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADRE 74
Query: 435 KMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
KMTQIMFETF P+M + +QA LSL S T VLD GDG
Sbjct: 75 KMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDG 115
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 152 bits (369), Expect = 1e-37
Identities = 75/114 (65%), Positives = 85/114 (74%)
Frame = +3
Query: 213 DGRHGTERLVRRRRAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPV 392
DG + E V + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV P EHPV
Sbjct: 36 DGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPV 94
Query: 393 LLTEAPLNPKANREKMTQIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGD 554
LLTEAP NPKANREKMTQIMFE+F+ PAM V++Q+VL L S T VLD G+
Sbjct: 95 LLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRA 264
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 111 bits (267), Expect = 3e-25
Identities = 48/94 (51%), Positives = 64/94 (68%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANREKMTQIMF 455
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 456 ETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
E +N + + IQAVL+L + T V+D GDG
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDG 159
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 252
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.5 bits (222), Expect = 9e-20
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Frame = +3
Query: 225 GTERLVRRRRAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTE 404
G E L + R + + L YPIEHG V +WD ME+ W +N LR P +H LLTE
Sbjct: 71 GDEALAKSRSSSTHN----LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 405 APLNPKANREKMTQIMFETFNTPAMXVAIQAVLSL-----TRSVVPTVFVLDFGDG 557
+PL P +RE +I+FETFN P + +A+ +VL+L T T V+D GDG
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDG 182
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 83.4 bits (197), Expect = 9e-17
Identities = 39/98 (39%), Positives = 59/98 (60%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANREKMT 443
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 444 QIMFETFNTPAMXVAIQAVLSLTRSVVPTVFVLDFGDG 557
++MFE + PA+ +A VL+ + T V+D G G
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGG 182
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 63.7 bits (148), Expect = 8e-11
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 213 DGRHGTERLVRRRRAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHP 389
D G +L +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 390 VLLTEAPLNPKANREK 437
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPX-EHPVLLTEAPLNPKANREKMTQIMFETFN 467
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 468 TPAMXVAIQAVLSL 509
+ QAVLSL
Sbjct: 117 VSGFYASEQAVLSL 130
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 195
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANREKMTQIMFET 461
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 462 FNTPAMXVA 488
F ++ +A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 198
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPXEHPVLLTEAPLNPKANREKMTQIMFETFN 467
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 468 TPAMXVAIQAVLS 506
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 252
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.074
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 227 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 90
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 203 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 117
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.5
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 392 DGMFLGGDTELIVEGMMPNLLHVIPVS 312
DG+ +GG E + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANREK 437
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANREK 437
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 203 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 81
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g13350.2 68417.m02088 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 438 MTQIMFET-FNTPAMXVAIQAVLSLTRSVVP 527
++ I F+T F TPA VAIQA LS T P
Sbjct: 282 LSLIDFDTDFETPAPSVAIQAPLSTTSQPAP 312
>At4g13350.1 68417.m02087 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 438 MTQIMFET-FNTPAMXVAIQAVLSLTRSVVP 527
++ I F+T F TPA VAIQA LS T P
Sbjct: 282 LSLIDFDTDFETPAPSVAIQAPLSTTSQPAP 312
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 39 LRTCHLFNNTILIQDVRRGSCRVGSRQWL 125
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 315 NWDDMEKIWHHTFYNELRVAPXEHPVLLTEAPLNPKANREKMTQIMFETF 464
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,331,692
Number of Sequences: 28952
Number of extensions: 260535
Number of successful extensions: 696
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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