Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0208
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051710-1|AAK93134.1|  745|Drosophila melanogaster LD24835p pro...    28   9.5  
AF221547-1|AAF34654.1|  742|Drosophila melanogaster RhoGTPase pr...    28   9.5  
AF217287-1|AAF44065.1|  745|Drosophila melanogaster G protein Rh...    28   9.5  
AE014296-3345|AAF51585.3|  745|Drosophila melanogaster CG5701-PA...    28   9.5  

>AY051710-1|AAK93134.1|  745|Drosophila melanogaster LD24835p
           protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 467 KVH--HELNQFCSAHTCTRYTLIC 532
           K+H  H+L ++C ++ C  Y LIC
Sbjct: 605 KLHNAHQLAEWCMSYLCVNYNLIC 628


>AF221547-1|AAF34654.1|  742|Drosophila melanogaster RhoGTPase
           protein.
          Length = 742

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 467 KVH--HELNQFCSAHTCTRYTLIC 532
           K+H  H+L ++C ++ C  Y LIC
Sbjct: 605 KLHNAHQLAEWCMSYLCVNYNLIC 628


>AF217287-1|AAF44065.1|  745|Drosophila melanogaster G protein
           RhoBTB protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 467 KVH--HELNQFCSAHTCTRYTLIC 532
           K+H  H+L ++C ++ C  Y LIC
Sbjct: 605 KLHNAHQLAEWCMSYLCVNYNLIC 628


>AE014296-3345|AAF51585.3|  745|Drosophila melanogaster CG5701-PA
           protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 467 KVH--HELNQFCSAHTCTRYTLIC 532
           K+H  H+L ++C ++ C  Y LIC
Sbjct: 605 KLHNAHQLAEWCMSYLCVNYNLIC 628


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,627,205
Number of Sequences: 53049
Number of extensions: 462277
Number of successful extensions: 850
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)