Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0206
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0463 + 3502708-3503535 34 0.066
11_06_0289 - 21969248-21973516 33 0.15
11_06_0185 + 21018045-21022307 33 0.15
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133... 30 1.4
06_03_0355 + 19822110-19824491 29 3.3
02_05_0527 + 29773528-29773771,29774785-29775141,29775228-29775250 29 3.3
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 29 3.3
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 28 4.3
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 28 4.3
05_01_0155 + 1043045-1043240,1043325-1043401,1043963-1044092,104... 28 5.7
12_01_0963 + 9608858-9609538 27 7.5
08_01_0056 + 379270-379803 27 7.5
06_03_1201 + 28359286-28359452,28360018-28360075,28361060-283611... 27 7.5
05_01_0186 - 1337657-1337977,1339142-1339203,1339297-1339346,133... 27 7.5
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 27 10.0
07_03_1364 + 26044559-26044672,26045732-26046334 27 10.0
05_01_0242 + 1804183-1806096 27 10.0
>07_01_0463 + 3502708-3503535
Length = 275
Score = 34.3 bits (75), Expect = 0.066
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = +3
Query: 324 EQTNN--FIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE-V 494
E+TN+ + A E +D K++ + K+E + +L+ +LK+ LEG K++ +E++ A+ +
Sbjct: 180 EKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKEELEG-GKSKNAIEEKPAQTL 238
Query: 495 YKAIE 509
K IE
Sbjct: 239 EKGIE 243
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 357 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI 506
+A + ++TH+ E + I +L RLKDH+E EKT+ EQ E A+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 357 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI 506
+A + ++TH+ E + I +L RLKDH+E EKT+ EQ E A+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436
>01_06_0042 -
25911662-25911736,25912409-25912607,25913275-25913348,
25913431-25913580,25913666-25913821,25915378-25915464,
25915706-25915765,25915878-25916414,25917292-25917585
Length = 543
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 293 QDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGKTRGLHQRAALPSQG 436
+DRGG HP+RA E R +R +GD R +R SQG
Sbjct: 32 EDRGGHRHPERAGEEQERAED--DKRDEGDGERDAREDKERREGDSQG 77
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 58 EAMEVETKSTE-IRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQETXKAA 234
E +EV T +TE + S + + E V P ++ TP+ EE++ T A
Sbjct: 722 EEVEVTTPATEEVEVTTPSTKEVEVTIAATEEAEVTTPATEEAEVSTPATEEVEGTTPAT 781
Query: 235 EE 240
E+
Sbjct: 782 EK 783
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 58 EAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQETXKAAE 237
E +V T +TE+ + G+ E V V P TP+ EE + T A E
Sbjct: 663 EEAKVTTPATEVAEVTTAATGVEVTTPATEKVEVTTPATEKVEVTTPATEEAKITTAATE 722
Query: 238 E 240
E
Sbjct: 723 E 723
>02_05_0527 + 29773528-29773771,29774785-29775141,29775228-29775250
Length = 207
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 464 PGLLNTLKMILETGAQLVDVGLAFFLVGLHLGVESLL 354
PGL+ TLKM GA VG GL++GVE L+
Sbjct: 143 PGLIRTLKMCGSYGATFAAVG------GLYIGVEQLV 173
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 318 RSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGV 452
RS +++I+ +K + TH+E E+ +NE ++ +K L+ V
Sbjct: 139 RSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLKKV 183
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 160 PVPRRADSPE-KTPSVEEIQETXKAAEERRRSLKL 261
P PR ++ KTP + E++E ++ +ER ++L+L
Sbjct: 143 PAPRVSEEDATKTPEIFELREMVRSLQEREKTLEL 177
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/53 (24%), Positives = 31/53 (58%)
Frame = +3
Query: 354 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEI 512
KEA A++ EE+++ + E L++ + +E ++ + TAEV++ +++
Sbjct: 259 KEAEKAEVLKEEERKDMTLEEYEKVLEEKRKALEDSKSEGRKVTAEVFEGMQL 311
>05_01_0155 +
1043045-1043240,1043325-1043401,1043963-1044092,
1044376-1044473,1045622-1045729,1045748-1045800,
1046876-1047080
Length = 288
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 369 AKMETHEEKREAYINELRS--RLKDHLEGVEKTRLTLEQQTAE 491
A+ E++ K + N S L++H++ +EKT +T Q++ E
Sbjct: 83 AEAESYASKEQVRYNRFLSPRALREHIKNIEKTAVTALQESPE 125
>12_01_0963 + 9608858-9609538
Length = 226
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 341 HRRHQGGSRRQDGDPRGKTRGLHQRAALPSQGSS*GC 451
HRRHQGG RR PR + R A + + G GC
Sbjct: 183 HRRHQGGRRR----PRLEVRAEAASAMVVANGVVGGC 215
>08_01_0056 + 379270-379803
Length = 177
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 341 HRRHQGGSRRQDGDPRGKTRGLHQRAALPSQGSS*GC 451
HRRHQGG RR PR + R A + + G GC
Sbjct: 134 HRRHQGGRRR----PRLEVRAEAASAMVVANGVVGGC 166
>06_03_1201 +
28359286-28359452,28360018-28360075,28361060-28361152,
28362100-28362421,28362698-28362982,28363431-28363459
Length = 317
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 269 GRHCSEDGQD---RGGVPHPQRADE*LHRRHQGGSRRQDGDP 385
GRH GQ RGG PH QRA R GG Q G P
Sbjct: 16 GRHGIAGGQGHLPRGGAPHRQRAAS----RGGGGEDGQQGKP 53
>05_01_0186 -
1337657-1337977,1339142-1339203,1339297-1339346,
1339447-1339544,1340622-1341002,1341123-1341128,
1341380-1341886,1342039-1342113,1342209-1342397
Length = 562
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 333 NNFIVATKEALDAKMETHEE-KREAYINELRSRLKDH 440
N+ I EALD ++TH E + + S LKDH
Sbjct: 367 NSMISEAGEALDEYIQTHSEVSHRGVLGNISSILKDH 403
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +3
Query: 327 QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI 506
++N + A +E L +K+ +E +EL S+L +H+EG+ T+E + A+ KAI
Sbjct: 2166 KSNQKVSALEEQLASKINELKEV-SVEKDELTSKL-NHIEGIS---YTMEDELADKSKAI 2220
Query: 507 E 509
E
Sbjct: 2221 E 2221
>07_03_1364 + 26044559-26044672,26045732-26046334
Length = 238
Score = 27.1 bits (57), Expect = 10.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 294 WPSSEQWRPSY 262
WPS E+WRP Y
Sbjct: 68 WPSYEEWRPEY 78
>05_01_0242 + 1804183-1806096
Length = 637
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 513 LSRWPCTLPRSAVPGSTWSSQHPQDDP*DGSAAR 412
LS P T R+ +P ++ P+ DP G +AR
Sbjct: 19 LSTAPATSHRNKIPADPSRTERPRPDPGSGDSAR 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,528,018
Number of Sequences: 37544
Number of extensions: 229010
Number of successful extensions: 929
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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