Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0205
(560 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 30 0.27
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 1.1
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 27 2.5
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 3.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 3.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 5.8
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 25 5.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 7.6
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 7.6
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.9 bits (64), Expect = 0.27
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +3
Query: 339 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 509
T N I++ + + + HEE + ELR++++++++ E+ ++ E+Y+
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQ 141
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 19 SSDAIQLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYE 141
S D L+ L R + +E E ++ +C E K L YE
Sbjct: 2534 SLDEHDLYHGLWRRRANFLETEVATSHEQCHEWEKAQLVYE 2574
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 4 IRHERSSDAIQLFRSLCRLKVEAMEVETKSTEIRCQEM 117
+ + DA +FRS+CRL V + K + IR Q M
Sbjct: 381 VENSSIQDAFLVFRSMCRLAVRQTSPD-KVSNIRSQAM 417
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 500
+Q VA ++A +E K E + + + SR+K + +E TRL + Q E
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIE 516
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 366 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 488
E L K+++ ++++ INEL R+K + V + T+++
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDE 570
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 5.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 70 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPS 210
A+ ETKST ++ GG A +A P +P P +P P+
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPA 910
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 5.8
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 357 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKPSKIR*P 530
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK + R
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64
Query: 531 QLPT 542
Q T
Sbjct: 65 QEET 68
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.0 bits (52), Expect = 7.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 351 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK 467
I+A + L A+ E +E+ E +NE R+K+ E +K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQK 1630
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.0 bits (52), Expect = 7.6
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 330 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 509
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 510 ---PSKIR 524
P K++
Sbjct: 451 EIGPEKVK 458
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,761,708
Number of Sequences: 5004
Number of extensions: 26995
Number of successful extensions: 122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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