Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0205
         (560 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)               36   0.017
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.37 
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)            29   3.4  
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.5  
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)                 28   4.5  
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)                  28   6.0  
SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)                        28   6.0  
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.0  
SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05)                     27   7.9  
SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14)              27   7.9  

>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
          Length = 299

 Score = 36.3 bits (80), Expect = 0.017
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +3

Query: 324 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 488
           I  EQ        +E +  KME  +EKR++Y+  L++RL +    VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEE 243


>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 263

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +3

Query: 357 ATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEV 503
           A ++AL+A     +E R+  + ELR ++ +  E  +E+ R+  E+Q AE+
Sbjct: 52  AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEI 101


>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
          Length = 1774

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 363  KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
            K+  D+  E H+E ++  + E     K H+E ++ T + +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464


>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 611

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 315 PPRSWPSSEQWRPSY 271
           PP ++PSS+QW P+Y
Sbjct: 508 PPGAYPSSDQWIPAY 522


>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
          Length = 1997

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +3

Query: 318  SRIRSEQTNNFIVATK-EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 494
            SR+ SE  +  I   K +  +A +E  ++K +  INE R +L++    ++ ++      +
Sbjct: 1455 SRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINEWRVKLEEVQADLDNSQKEARNYS 1514

Query: 495  AEVYK 509
             E+YK
Sbjct: 1515 TEMYK 1519


>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
          Length = 440

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +3

Query: 369 ALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 503
           AL  K     +  +  +N+   +L + +EG++ T +TL+QQ  ++
Sbjct: 235 ALQKKYSDELKSSQDELNDFVIQLDEEVEGMQSTIMTLQQQIKDI 279


>SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)
          Length = 1220

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +1

Query: 10  HERSSDAIQLFRSLCRLKVEAM---EVETKSTEIRCQEMS 120
           H    DA  +FRSLC+L ++ +    ++ KS E+R + +S
Sbjct: 528 HVTQKDAFLVFRSLCKLSMKPLADGPLDPKSHELRSKILS 567


>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 497

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +3

Query: 336 QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYK 509
           QT   I+   E     ME  + + E    EL  +L+       K  T+L L Q+TAE YK
Sbjct: 401 QTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLERDSHKYRTKLELAQKTAETYK 460


>SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05)
          Length = 203

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 79  VETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEK 201
           +E +  +I C   +K GL   +   +  G P+PRRA  P K
Sbjct: 127 IERQGGKITCAHYNKLGLRVLLKPEKFEGKPIPRRAHPPSK 167


>SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14)
          Length = 620

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +1

Query: 88  KSTEIRCQEMSKGGLAYEVI--LAEPVGV 168
           K+TE++CQ +++GG+A   +  + E +GV
Sbjct: 202 KNTELQCQSINRGGVAKASVMYIVEDIGV 230


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,289,800
Number of Sequences: 59808
Number of extensions: 243425
Number of successful extensions: 839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)