Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0205
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p pro...    71   8e-13
AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p pro...    71   8e-13
AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19 ...    71   8e-13
AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13 ...    71   8e-13
AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14 ...    71   8e-13
AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1 p...    71   8e-13
AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-P...    71   8e-13
AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-P...    71   8e-13
AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-P...    71   8e-13
AY051441-1|AAK92865.1|  513|Drosophila melanogaster GH11294p pro...    29   4.3  
AE013599-1856|AAF58272.1|  513|Drosophila melanogaster CG8503-PA...    29   4.3  
AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA...    29   5.7  
AY058313-1|AAL13542.1|  571|Drosophila melanogaster GH07353p pro...    28   7.5  
AE014296-2363|AAF49754.2|  571|Drosophila melanogaster CG32139-P...    28   7.5  

>BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p
           protein.
          Length = 257

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 498 EVYK 509
              K
Sbjct: 147 NEQK 150



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 79  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 51


>AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p
           protein.
          Length = 250

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 498 EVYK 509
              K
Sbjct: 192 NEQK 195



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 96


>AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19
           protein.
          Length = 254

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 84  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 143

Query: 498 EVYK 509
              K
Sbjct: 144 NEQK 147



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 2   KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 48


>AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13
           protein.
          Length = 174

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 498 EVYK 509
              K
Sbjct: 147 NEQK 150



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 79  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 51


>AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14
           protein.
          Length = 257

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 498 EVYK 509
              K
Sbjct: 147 NEQK 150



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 79  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 51


>AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1
           protein.
          Length = 234

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 498 EVYK 509
              K
Sbjct: 147 NEQK 150



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 79  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 51


>AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-PA,
           isoform A protein.
          Length = 250

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 498 EVYK 509
              K
Sbjct: 192 NEQK 195



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 96


>AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-PB,
           isoform B protein.
          Length = 302

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 498 EVYK 509
              K
Sbjct: 192 NEQK 195



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 96


>AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-PC,
           isoform C protein.
          Length = 257

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +3

Query: 318 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 497
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 498 EVYK 509
              K
Sbjct: 147 NEQK 150



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 79  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSV 213
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSV 51


>AY051441-1|AAK92865.1|  513|Drosophila melanogaster GH11294p
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 34  QLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGL 132
           +LF+  C   V+  E++T  + I+C++   GGL
Sbjct: 292 KLFKCACERCVDVTELDTNYSAIKCEDRQCGGL 324


>AE013599-1856|AAF58272.1|  513|Drosophila melanogaster CG8503-PA
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 34  QLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGL 132
           +LF+  C   V+  E++T  + I+C++   GGL
Sbjct: 292 KLFKCACERCVDVTELDTNYSAIKCEDRQCGGL 324


>AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA
            protein.
          Length = 2002

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 366  EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 503
            EA DA    +       + E+R  L + LE V K    L+Q+T EV
Sbjct: 1649 EATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEV 1694


>AY058313-1|AAL13542.1|  571|Drosophila melanogaster GH07353p
           protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 320 PHPQRADE*LHRRHQGGSRRQDGDPRGKT-RGLHQRAAL 433
           PH     +  H+ H   S   +G P G T  GLH  +AL
Sbjct: 74  PHQSPQHQQQHQHHPCSSNSSNGSPNGSTGLGLHPHSAL 112


>AE014296-2363|AAF49754.2|  571|Drosophila melanogaster CG32139-PA
           protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 320 PHPQRADE*LHRRHQGGSRRQDGDPRGKT-RGLHQRAAL 433
           PH     +  H+ H   S   +G P G T  GLH  +AL
Sbjct: 74  PHQSPQHQQQHQHHPCSSNSSNGSPNGSTGLGLHPHSAL 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,466,981
Number of Sequences: 53049
Number of extensions: 354752
Number of successful extensions: 1516
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)