Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0205
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.32
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.32
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 32 0.32
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 32 0.32
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 5.3
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 27 7.0
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 7.0
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 27 7.0
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 333 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 494
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 333 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 494
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 333 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 494
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 333 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 494
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 330 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 509
SE +++ + +D + EEK E +NE+ LK E V+ + E +T EV
Sbjct: 392 SEINEKILISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGELKTREVNM 451
Query: 510 PSK 518
S+
Sbjct: 452 TSE 454
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +3
Query: 381 KMETHEEK-REAYINELRS---RLKDHLEGVEKTRLTLEQQTAEVYKPSK 518
K++T ++K E Y+N++R LKD+ EG+EK ++ + E+ + K
Sbjct: 204 KLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKK 253
>Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical
protein T16G1.2 protein.
Length = 407
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 387 ETHEEKREAYINELRSR-LKDHLEGVEKTRLTLEQQTAEVYKP 512
E H+EK+ + + + + +DH G+E+T ++++ + E+ +P
Sbjct: 113 EKHDEKKMSDNDVITNEEAEDHARGIERTTMSIKPREGEITEP 155
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 546 RLSAAVVILSSMACTLPRSAVPGSTWSSQR 457
RL AA+++L ++ T+ +A+P S W S +
Sbjct: 23 RLVAAILLLGAVQATINCAAIPTSLWCSNK 52
>Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical
protein F56H6.2 protein.
Length = 373
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 384 METHEEKREAYINELRS-RLKDHLEGVEKTRLTLEQQTAEVYKP--SKIR*PQLPTSATR 554
+ET K E NEL+ R+K HL V TLE+ +VYKP +I P LP R
Sbjct: 43 VETTLNKVEIAPNELKDYRVKTHLGSV-----TLEELNEKVYKPFGYEILHPTLPVPTLR 97
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 387 ETHEEKR--EAYINELRSRLKDHLEGVEKTR 473
E HE K+ E +NEL R K HL+ +E+ R
Sbjct: 422 EFHEYKKQQEVIVNELNHREKAHLDTIEQLR 452
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 363 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 503
+E AK++ +EE+R + LK E EK +L EQ+ E+
Sbjct: 65 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 111
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 363 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 503
+E AK++ +EE+R + LK E EK +L EQ+ E+
Sbjct: 899 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 945
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 363 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 503
+E AK++ +EE+R + LK E EK +L EQ+ E+
Sbjct: 65 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 111
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 318 SRIRSEQTNNFIVA-TKEALDAKMET---HEEKREAYINELRSRLKDHLEGVEKTRLTLE 485
+ IR E F +A TK AK+ + HEEKR+ E+R++ ++ + +E + L
Sbjct: 830 AHIRKEIELEFKLARTKSEFTAKIASKASHEEKRKKEDEEMRAKYRELAQCLEDAKSGLH 889
Query: 486 QQTA 497
++ A
Sbjct: 890 EKIA 893
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,121,785
Number of Sequences: 27780
Number of extensions: 169170
Number of successful extensions: 705
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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