Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0204
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   105   2e-25
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    95   3e-22
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   5.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  105 bits (253), Expect = 2e-25
 Identities = 50/108 (46%), Positives = 72/108 (66%)
 Frame = +1

Query: 148 AKKNLLLFFDRPSEPCFMQKGEEKAVFDIPDNYYPEXTSVCQML*ATGSVATRXRMIPIR 327
           +KKNLLL FDRP EP F+ KG +K VFDIP++Y  +      +  +          +P++
Sbjct: 2   SKKNLLLLFDRPQEPVFIGKGSKKTVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVK 61

Query: 328 NIALPNLDLPMELPYNEQFSLFVPKHRQMAGKLIDIFMGMRDVEDLQS 471
            I++P L   +EL  +  FSLF+PKHR++AG+LIDIF+GMR+V+DL S
Sbjct: 62  KISIPPLGEILELERDANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLS 109



 Score = 27.1 bits (57), Expect = 0.11
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 510 FNYCLSVAILHRSD 551
           F+Y LSVAILHR D
Sbjct: 123 FSYALSVAILHRQD 136


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 95.5 bits (227), Expect = 3e-22
 Identities = 50/111 (45%), Positives = 69/111 (62%)
 Frame = +1

Query: 139 MSDAKKNLLLFFDRPSEPCFMQKGEEKAVFDIPDNYYPEXTSVCQML*ATGSVATRXRMI 318
           M+D K  LLL FDRP EP FM KG  K VFD+P+N+ PE      +  A          I
Sbjct: 1   MTD-KSKLLLLFDRPQEPAFMPKGN-KEVFDVPNNFLPERYKPIGVQIANRFGEQANEKI 58

Query: 319 PIRNIALPNLDLPMELPYNEQFSLFVPKHRQMAGKLIDIFMGMRDVEDLQS 471
           P+++I  P+L+  ++L  +E FSLF+PKHR++AGKLI IF+    ++DL S
Sbjct: 59  PLKDITPPDLEGILDLGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLS 109



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 510 FNYCLSVAILHRSD 551
           F Y  SVA+LHR D
Sbjct: 123 FYYAFSVALLHRPD 136


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 177 PSLRAMLHAKGRREGSIRYS 236
           P+L+ ++   G  EGS+ YS
Sbjct: 90  PNLKTLVAIGGWNEGSVNYS 109


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 177 PSLRAMLHAKGRREGSIRYS 236
           P L+ +L   G  EGS +YS
Sbjct: 91  PDLKIILSMGGWNEGSYKYS 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,888
Number of Sequences: 336
Number of extensions: 2135
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)