Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0203
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.58 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 73  TEPQSPTPNSKTIFTTASSLPIT 141
           T   +PT +S+++ T+ SS+P T
Sbjct: 89  TSTSNPTYSSRSVMTSCSSVPTT 111


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 60  SFIANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYED 179
           SF+  G +      E D++N  L  D D  ++  + IY D
Sbjct: 316 SFLQEGANKFVICGESDIFNGHLNPDNDEVLQVLEDIYSD 355


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 338 IKLMYKRDGLXLTLRDDSNNDGRLAYGDGKDKTSPKV 448
           IKL+ +++       D++  + +   G+ KDK  PK+
Sbjct: 211 IKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/19 (36%), Positives = 16/19 (84%)
 Frame = +2

Query: 299 FPVEFTLIFAENNIKLMYK 355
           FP++++L+F+E  + L++K
Sbjct: 701 FPIDYSLVFSETKL-LLFK 718



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/11 (45%), Positives = 11/11 (100%)
 Frame = +2

Query: 299  FPVEFTLIFAE 331
            FP+++TL+F++
Sbjct: 1079 FPIDYTLVFSK 1089


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 345 SLMLFSAKISVNSTGKHSRTISLEPCI 265
           SL+L S   ++    KH R   L PC+
Sbjct: 9   SLVLISKIFALLPVKKHHRLEKLVPCV 35


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = +2

Query: 299 FPVEFTLIFAENNIKL 346
           FP+ +TL+F+  ++++
Sbjct: 380 FPINYTLVFSVRSVQV 395


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 244 WSTPPALDARLQGYRPGVL 300
           WS+PP   A     R GVL
Sbjct: 125 WSSPPDARAASDAARRGVL 143


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 244 WSTPPALDARLQGYRPGVL 300
           WS+PP   A     R GVL
Sbjct: 281 WSSPPDARAASDAARRGVL 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,078
Number of Sequences: 336
Number of extensions: 2172
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)