Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0203
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    26   0.96 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.3  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    25   1.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   2.9  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   3.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.0  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 425 KDKTSPKVSWKFVPLWENNKVYFKIVNTSVISI 523
           KDK  PK+SW      +NN+     + T VIS+
Sbjct: 529 KDKLYPKISWFGKGFGKNNEPVRGYILTFVISV 561


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 335 NIKLMYKRDGLXLTLRDDSNNDGRLAYGDGKDKTSPKVSWKFVP 466
           N+K+  K+  +    R ++ ND  +  G  K   S K+ W   P
Sbjct: 680 NVKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKP 723


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 8/45 (17%), Positives = 24/45 (53%)
 Frame = +2

Query: 164 TDLRGQEERSHHKCRKQTHTKQQDELHGVRHQLWMQGSKDIVREC 298
           ++++  + +  +KC    +T+  +++H ++ Q +M+       EC
Sbjct: 22  SEVQDDKCKRKYKCCNDANTENMEKIHEIKKQCFMEMEVICAMEC 66


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +1

Query: 388 QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEH*RNQYLTLSVKTTPTQ 555
           QQQ+ Q   ++ Q Q + + Q +      +QQ   Q  +  + Q  T  V+  P+Q
Sbjct: 190 QQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQ 245



 Score = 23.4 bits (48), Expect = 5.1
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +1

Query: 325 RRKQH*ADVQARRSXFDVAR*QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQ 483
           +++QH    Q ++      + QQQR Q   ++ Q Q + + Q + R    +QQ
Sbjct: 307 QQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ 359


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 517 DYASVHNLEVDLVVLPQRNELPADF 443
           D  S+  +E+   +  ++NELPADF
Sbjct: 171 DAVSLEFMEIMANLRDEKNELPADF 195


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 179 QEERSHHKCRKQTHT 223
           +EE+ H +C KQ+ T
Sbjct: 483 REEKHHERCAKQSET 497


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,220
Number of Sequences: 2352
Number of extensions: 8576
Number of successful extensions: 57
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)