Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0203
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 30 0.98
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 30 1.3
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 30 1.3
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 29 1.7
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 3.0
U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 5.2
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 5.2
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 27 6.9
U00067-11|AAK20076.2| 207|Caenorhabditis elegans Regulator of c... 27 6.9
AF176115-1|AAF01683.1| 207|Caenorhabditis elegans Down Syndrome... 27 6.9
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 27 9.1
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 27 9.1
AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein. 27 9.1
AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein. 27 9.1
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 275 SKDIVRECFPVEFTLIFAENNIKLMYKRDGLXLTLRDDSNNDGRLAYGDGKDKTSPKVSW 454
+ ++RECFP +I + +Y ++G+ + DS DG L + K+S +
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLWALLVIKSSMEQDK 602
Query: 455 KFVPL 469
FV L
Sbjct: 603 SFVNL 607
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 67 LPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 234
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 235 *TAWSTPPALDARLQGYRPGVL 300
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 67 LPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 234
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 235 *TAWSTPPALDARLQGYRPGVL 300
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 67 LPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 234
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 235 *TAWSTPPALDARLQGYRPGVL 300
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 67 LPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 234
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 235 *TAWSTPPALDARLQGYRPGVL 300
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 88 PTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPPA 261
P P + T+ S PIT K +R + +R K ++ TT T S PPA
Sbjct: 434 PPPETATVALPNSLPPITVSARSKNSRKSTLKRKKKKTSKDSSMTTTTTNTNESEPPA 491
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 57 ASFIANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNV 206
+SF +G S DS L +DL ++I A AVE K +YE + +N+
Sbjct: 457 SSFALSGLSTDDSSL-NDLDDAIRSASIRKAVEGPKGVYECGSWDSASNI 505
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 70 PTEPQSPTPNSKTIFTTASSLPITT---MPLKKANRSTRTRRAKSSQMS*TNSYETTR 234
PT Q+ TP + TI TT +P TT PL+K N + A S M N T +
Sbjct: 94 PTSTQTTTPTTTTITTT--PVPTTTPYLSPLEKFNEAMNNDGAFKSLMDVINFNSTAK 149
>U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical
protein C56C10.6 protein.
Length = 422
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 49 FSWRLLLPTEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQ 201
F W + + T P TP SK++ T S ++ +KKA+R + K+S+
Sbjct: 305 FDWEMPISTTPSKSTP-SKSV--TKSPAQLSKETVKKASREKTLSKEKTSK 352
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = +3
Query: 42 LCLFVASFI----ANGTSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 194
LCL S I N + + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 242 LCLQRESLIRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 70 PTEPQSPTPNSKTIFTTASSLPITTMPLKKAN 165
PT + TP+S + T SSLP T+ L N
Sbjct: 206 PTADNASTPSSSSSITATSSLPTTSSSLSVYN 237
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 79 PQSPTPNSKTIFTTAS-SLPITTMPLKKANRSTRTR 183
PQ P P +T T +LP TT+P+ N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 141 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCME 248
+NA E SKQ+Y D K+ +++N ++ + + M ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ 86
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 141 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCME 248
+NA E SKQ+Y D K+ +++N ++ + + M ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ 86
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 34 KLFCVFSWRLLLPTEPQSPTPN-SKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS* 210
++ C + R T +PT + TI T+ +++ TT+ KA +T+T + ++
Sbjct: 195 QIICKYCPRETTSTTTVTPTTTKAATIKTSTTTVTPTTVTTTKAPTTTKTSTSTTTPKFT 254
Query: 211 TNSYETTR 234
T + +TT+
Sbjct: 255 TTTIQTTK 262
>U00067-11|AAK20076.2| 207|Caenorhabditis elegans Regulator of
calcineurin protein 1 protein.
Length = 207
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 66 IANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQ 167
+ANG+ +S +DDL N+I+V V +KQ
Sbjct: 13 VANGSLISTVSSKDDLPNAIIVTQVPEDVFDNKQ 46
>AF176115-1|AAF01683.1| 207|Caenorhabditis elegans Down Syndrome
candidate region1-like protein protein.
Length = 207
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 66 IANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQ 167
+ANG+ +S +DDL N+I+V V +KQ
Sbjct: 13 VANGSLISTVSSKDDLPNAIIVTQVPEDVFDNKQ 46
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 46 VFSWRLLLPTEPQSPTPNSKTIFTTASSLPITTMPLK 156
V + R +PT P+ P +T T AS L T +P+K
Sbjct: 647 VSTQRAPVPTTPRPTAPAVQTTTTRASRLETTRVPVK 683
>Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical
protein C32A3.1b protein.
Length = 468
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 376 VAR*QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEH*RNQYL 525
+A+ QQQ+ + L + Q Q+ + + + R + +QQ Q EH R Q L
Sbjct: 317 IAQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQML 366
>Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical
protein C32A3.1a protein.
Length = 490
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 376 VAR*QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEH*RNQYL 525
+A+ QQQ+ + L + Q Q+ + + + R + +QQ Q EH R Q L
Sbjct: 339 IAQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQML 388
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 487 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVA 389
+L++LP LP++ TR+ GK +V+A
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIA 813
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 487 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVA 389
+L++LP LP++ TR+ GK +V+A
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIA 813
>AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein.
Length = 468
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 376 VAR*QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEH*RNQYL 525
+A+ QQQ+ + L + Q Q+ + + + R + +QQ Q EH R Q L
Sbjct: 317 IAQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQML 366
>AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein.
Length = 490
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 376 VAR*QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEH*RNQYL 525
+A+ QQQ+ + L + Q Q+ + + + R + +QQ Q EH R Q L
Sbjct: 339 IAQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQML 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,148,763
Number of Sequences: 27780
Number of extensions: 202558
Number of successful extensions: 781
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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