Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0202
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026213-7|AAB71308.2|  151|Caenorhabditis elegans Tetra thymosi...    50   1e-06
AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical...    29   3.0  
Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AF022981-2|AAG24200.1|  236|Caenorhabditis elegans Hypothetical ...    28   3.9  
AF039040-2|AAO91670.1|  615|Caenorhabditis elegans Hypothetical ...    27   6.9  
AF039040-1|AAB94184.1|  553|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z29561-5|CAA82668.1|  395|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF040645-7|AAB94977.2|  304|Caenorhabditis elegans Hypothetical ...    27   9.1  

>AF026213-7|AAB71308.2|  151|Caenorhabditis elegans Tetra thymosin
           (four thymosin repeatprotein) protein 1 protein.
          Length = 151

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 35/61 (57%)
 Frame = +1

Query: 265 QLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNPLPXKDVIEQE 444
           +LK  ET  KN LP K+ +  EK+  + +  IE+FD TKL  T    K  LP  D I+QE
Sbjct: 23  ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82

Query: 445 K 447
           K
Sbjct: 83  K 83



 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 26/72 (36%), Positives = 35/72 (48%)
 Frame = +1

Query: 235 IRRYREVDSSQLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNP 414
           I      DS++L  T  + K  LP  D I+ EK+  +    I NF    LK TET  KN 
Sbjct: 51  IHEIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNV 110

Query: 415 LPXKDVIEQEKS 450
           LP    + +EK+
Sbjct: 111 LPSPTDVAREKT 122



 Score = 35.9 bits (79), Expect = 0.020
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 128 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGI 247
           ++E F+++ L      EKIVLPSA+D+  EK    L D I
Sbjct: 53  EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKI 92



 Score = 33.9 bits (74), Expect = 0.079
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 86  SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE 250
           ++ +LPK+  +L   + EG     L+ V+T EK VLP+ EDVA EK        IE
Sbjct: 3   AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIE 55



 Score = 33.9 bits (74), Expect = 0.079
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 83  PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKT 223
           PS  D+   K   +L  ++  F +  L+  +T EK VLPS  DVA EKT
Sbjct: 74  PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122


>AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical
           protein T02H6.2 protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +1

Query: 247 REVDSSQLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNPLPXK 426
           R++DSS++K ++T   NP    D I +++   +    +  F     K    C    LP  
Sbjct: 550 RKLDSSKVKPSQTSSPNPY--TDTILSDEHLTQLARDLSKFKSNLAK----CFGTKLPAD 603

Query: 427 DVIEQEK 447
           DV   EK
Sbjct: 604 DVTSDEK 610


>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 220 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 128
           LL  N+FS   H +F+G+ + E   +  F+L
Sbjct: 58  LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88


>AF022981-2|AAG24200.1|  236|Caenorhabditis elegans Hypothetical
           protein W03F9.2a protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 271 KHTETQXKNPLPDKDAIEAEKEKNKFLXGIE--NFD 372
           KHTET+ + P  +K    A+K  N  L  +E  N+D
Sbjct: 192 KHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227


>AF039040-2|AAO91670.1|  615|Caenorhabditis elegans Hypothetical
           protein T22B11.4b protein.
          Length = 615

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +1

Query: 280 ETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNPLPXKDVIEQEKSA*T 459
           E + K     K    +E+E       +E+ +PTKLK  E   K     ++  ++E++  T
Sbjct: 338 EEEKKEEGETKKEESSEEEDGVLKVNLEDIEPTKLKSQEDAKKKEGDEEEEKDEEEAETT 397

Query: 460 T 462
           T
Sbjct: 398 T 398


>AF039040-1|AAB94184.1|  553|Caenorhabditis elegans Hypothetical
           protein T22B11.4a protein.
          Length = 553

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +1

Query: 280 ETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNPLPXKDVIEQEKSA*T 459
           E + K     K    +E+E       +E+ +PTKLK  E   K     ++  ++E++  T
Sbjct: 338 EEEKKEEGETKKEESSEEEDGVLKVNLEDIEPTKLKSQEDAKKKEGDEEEEKDEEEAETT 397

Query: 460 T 462
           T
Sbjct: 398 T 398


>Z29561-5|CAA82668.1|  395|Caenorhabditis elegans Hypothetical
           protein R10E12.2 protein.
          Length = 395

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +1

Query: 220 DPEVFIRRYREVDSSQLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTET 399
           D    +R + E     + H E +     P  D+++  K K K      N   T +KHTE 
Sbjct: 110 DQSPSVRIFPEEHKKIVAHLEKEKPTGKPPMDSLKI-KVKGKCF----NATMTVIKHTER 164

Query: 400 CXKNPLPXK-DVIEQEKSA*TTXL 468
           C   P P +  +I QE  +  T L
Sbjct: 165 CPWCPDPKEITIIGQEPGSEATGL 188


>AF040645-7|AAB94977.2|  304|Caenorhabditis elegans Hypothetical
           protein F52C6.11 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 74  SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDV 208
           S   S K+  KVA   K QLE    SCL  ++T E+I    A D+
Sbjct: 243 SSEKSTKEKLKVAK--KYQLENLKASCLAKINTLEEIKAALAGDL 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,737,060
Number of Sequences: 27780
Number of extensions: 207019
Number of successful extensions: 678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)