Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0202
(555 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 30 0.90
At1g51900.1 68414.m05850 hypothetical protein 29 1.6
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 29 2.8
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 29 2.8
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi... 29 2.8
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 28 4.8
At5g20540.1 68418.m02439 expressed protein 27 8.4
At4g15820.1 68417.m02407 wound-responsive protein-related contai... 27 8.4
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 8.4
At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containi... 27 8.4
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 27 8.4
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 30.3 bits (65), Expect = 0.90
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 220 LLSGNVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLG 101
++ GN +KHNL IG+D AG + + LQ C ++G
Sbjct: 41 IMDGNRRFAKKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At1g51900.1 68414.m05850 hypothetical protein
Length = 774
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 220 DPEVFIRRYREVDSSQLKHTETQXKNPLPDKDAIEAEK 333
DP+++IR Y E + K + T + + + D+IE K
Sbjct: 362 DPDIYIRSYEESPNEVYKFSLTDLEEEIMENDSIEGVK 399
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +1
Query: 232 FIRRYREVDSSQLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKN 411
+ R +++ QL+ T+ + K P E +K I D K ++ E C
Sbjct: 348 YARVPKQLRPPQLEETDVKRKRNAPGPSPKEPAMKKQ-----ISEMDCDKEENAEDCFGE 402
Query: 412 PLPXKDVIEQEKS 450
P+P + ++E +S
Sbjct: 403 PVPERFIVEMRRS 415
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +1
Query: 232 FIRRYREVDSSQLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKN 411
+ R +++ QL+ T+ + K P E +K K D K ++ E C
Sbjct: 402 YARVPKQLCPPQLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEENAEDCFGE 456
Query: 412 PLPXKDVIEQEKS 450
P+P + ++E +S
Sbjct: 457 PVPERFIVEMRRS 469
>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 786
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 68 SVSDTPSLKDLPKVATDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVATEKTQKS 232
S+ + + DLPK+ + SQ E + S +DT E ++ P+AED E S
Sbjct: 78 SLEEVTNADDLPKIDDEKNSQFETSPHPSPSPSVALDTEEGLINPTAEDTVEENIVSS 135
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 68 SVSDTPS--LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 220
S SD+PS L+D+ ++ +LK L+G + VDTN AED A E+
Sbjct: 532 SDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTN-----LDAEDRAAER 579
>At5g20540.1 68418.m02439 expressed protein
Length = 384
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 71 VSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 217
++ TP + + T+ S +S RD D +E++ + +A DV E
Sbjct: 282 LNSTPKVSSISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNE 330
>At4g15820.1 68417.m02407 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 460
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 44 IY*FRMACSV---SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 184
I+ F+ C+V D+ + P+V++D EG N L DV+ NEKI
Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDS----EGNNLVLLEDVEMNEKI 137
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 265 QLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNPLPXKDVIEQE 444
QL+ T+ + K P E +K K D K + E C P+P + ++E
Sbjct: 393 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEETAEDCFGEPVPERFIVEMR 447
Query: 445 KS 450
+S
Sbjct: 448 RS 449
>At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -3
Query: 229 LLGLLSGNVFSRRKHNLFIGVDVTETAGVEAFELT----LQVCGDLGEVFQGGSVTHGAG 62
+ GL+SGN S L+ + ET G+ E+T L C LG+V +G ++ HG
Sbjct: 182 IAGLVSGNRASEAME-LYKRM---ETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 61 HSESI 47
+ I
Sbjct: 238 NDNVI 242
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 265 QLKHTETQXKNPLPDKDAIEAEKEKNKFLXGIENFDPTKLKHTETCXKNPLPXKDVIEQE 444
QL+ T+ + K P E +K K D K + E C P+P + ++E
Sbjct: 380 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEETAEDCFGEPVPERFIVEMR 434
Query: 445 KS 450
+S
Sbjct: 435 RS 436
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,277,798
Number of Sequences: 28952
Number of extensions: 200603
Number of successful extensions: 654
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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