Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0201
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 81 8e-16
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 62 4e-10
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 5e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 56 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 1e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 5e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.069
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 31 0.48
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 29 1.9
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 29 3.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 28 4.5
SB_23305| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 28 4.5
SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3) 28 4.5
SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 28 4.5
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 28 4.5
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 5.9
SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 5.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 5.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 5.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.9
SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 27 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 105 bits (251), Expect = 3e-23
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
M D+E+AALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 102 bits (244), Expect = 2e-22
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1
Query: 106 DEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+++VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 137 QAVLSLYASGRTTGIV 152
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 103 bits (247), Expect = 1e-22
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +1
Query: 106 DEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
++EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 137 QAVLSLYASGRTTGIV 152
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 109 bits (262), Expect = 2e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD++VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 189 bits (460), Expect = 2e-48
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 105 bits (251), Expect = 3e-23
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
M D+++AALV+DNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 103 bits (247), Expect = 1e-22
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1
Query: 106 DEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
D++VAALV+DNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 371
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 444 NREKMTQIMFETFNTPAMYVAIK 512
N + M +IMFETFN+PAMYVAI+
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQ 100
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 100 QAVLSLYASGRTTGIV 115
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +3
Query: 261 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 437
VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP
Sbjct: 57 VGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNP 116
Query: 438 KANREKMTQIMFETFNTPAMYVAIK 512
NREKM ++MFE + +Y+AI+
Sbjct: 117 MKNREKMIEVMFENYQFEGVYIAIQ 141
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 118 AALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRP--RHQGVMVGMGQKDLM 261
+ +V DNG+G K G+A + P +FPS+VGRP R + + KDLM
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLM 56
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 80.6 bits (190), Expect = 8e-16
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = +3
Query: 351 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 512
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 60.1 bits (139), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQ 225
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAV++LYASGR TG V
Sbjct: 2182 QAVMALYASGRTTGTV 2197
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 61.7 bits (143), Expect = 4e-10
Identities = 23/38 (60%), Positives = 33/38 (86%)
Frame = +3
Query: 399 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 512
+HPVLLTEAPLNP+ NREK ++ FETFN PA++++++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYA+GR TG+V
Sbjct: 163 QAVLSLYATGRTTGVV 178
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 5e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 309 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 488
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 489 PAMYV 503
PA ++
Sbjct: 63 PAFFL 67
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQ 225
E LV+D GS M K GFA DDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 258 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 416
++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 285 FIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 94 FKMCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVG 240
FK+ A+V+DNG G+ K GFA D PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -3
Query: 222 MAGPSHDRGEHGARSIIFCETGLAHTGAIVYYQRGNFFV 106
MA + D GE+G+ SI+ ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.7 bits (81), Expect = 0.013
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 225 GRDGRYGTEGSYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 395
GR G + G VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 396 EEHPVLLTEAPLNPKANRE 452
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 380
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 112 EVAALVVDNGSGMCKAGFAEDDAPRAV 192
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 16 QAVLSLYASGRTTGVV 31
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 465 IMFETFNTPAMYVAIK 512
IMFE FN+PA+YVAI+
Sbjct: 1 IMFEAFNSPAVYVAIQ 16
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = -1
Query: 314 DGVFEGQDTSFALCLISYIRSFCPIPTITP*WRGLPTIEGNTARGASSSAKPALHIPEPL 135
DG F+L L + IR + + W GNT R AKPAL++P P
Sbjct: 41 DGEMRAILNDFSLPLDAKIRHYNRVSNQYLKWLQQLKDGGNTNRRTRIPAKPALNLPSPP 100
Query: 134 STT 126
S T
Sbjct: 101 SKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ ++LSH + H M D +HG RS CET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 281 ALCLISYIRSFCPIPTITP*WRGLPTIEGNTARGASSSAKPALHIPEPLSTT 126
+L L + IR + + P W GNT R AKP+L++P P S T
Sbjct: 512 SLPLDAKIRHYNRLSNQYPKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 118 AALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRH 222
+ +++D GS KAGFA+++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 197 GNTARGASSSAKPALHIPEPLSTT 126
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 200 EGNTARGASS-SAKPALHIPEPLSTTNAATSS 108
+G T R SS SA+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 200 EGNTARGASS-SAKPALHIPEPLSTTNAATSS 108
+G T R SS SA+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_23305| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 808
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -2
Query: 541 TTGRVQREHGLMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATR 383
T G VQR GL+ + + N S +F L+ G R S S G S AT+
Sbjct: 275 TVGEVQRLLGLLGYHRQYIANFSKTAKCLFQLIQ-GPRDKSSSSKGGPSSATK 326
>SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 200
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 200 EGNTARGASS-SAKPALHIPEPLSTTNAATSS 108
+G T R SS SA+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 994
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -2
Query: 541 TTGRVQREHGLMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATR 383
T G VQR GL+ + + N S +F L+ G R S S G S AT+
Sbjct: 832 TVGEVQRLLGLLGYHRQYIANFSKTAKCLFQLIQ-GPRDKSSSSKGGPSSATK 883
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 197 GNTARGASSSAKPALHIPEPLSTT 126
GNT R AKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 270 HLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
H++ K ++ H H L++ P +HG R +FCET L T
Sbjct: 698 HIVSKHIMDHLSRHHLLS-PF----QHGFRERLFCETQLLVT 734
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 288 LFCSVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIIFCETGLAHT 145
L C ++ I+LSH + H L A +HG R + CET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34)
Length = 354
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 268 SPT*DPSVPYRPSRPDGGAFPRS-RGTRREE 179
SPT D V PSR GGA P+ RG R++E
Sbjct: 273 SPTADKQVADPPSRLLGGARPKEFRGHRKDE 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,102,634
Number of Sequences: 59808
Number of extensions: 451260
Number of successful extensions: 1292
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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