Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0201
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 190 4e-49
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 190 4e-49
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 190 4e-49
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 190 4e-49
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 190 4e-49
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 190 4e-49
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 190 4e-49
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 190 4e-49
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 190 4e-49
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 190 4e-49
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 186 7e-48
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 121 3e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 110 6e-25
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 110 6e-25
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 109 1e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 109 1e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 97 8e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 8e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.006
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.006
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.0
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.0
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.0
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.0
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.1
U41263-12|AAO38594.1| 422|Caenorhabditis elegans Hypothetical p... 27 9.1
U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical p... 27 9.1
U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical p... 27 9.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 138 QAVLSLYASGRTTGVV 153
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 109 bits (262), Expect = 1e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD++VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 138 QAVLSLYASGRTTGVV 153
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 138 QAVLSLYASGRTTGVV 153
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 138 QAVLSLYASGRTTGVV 153
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 107 bits (258), Expect = 4e-24
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD++VAAL++DNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 138 QAVLSLYASGRTTGIV 153
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 138 QAVLSLYASGRTTGVV 153
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQ 94
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 94 QAVLSLYASGRTTGVV 109
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1
Query: 154 KAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+AGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 38
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 124 QAVLSLYASGRTTGVV 139
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 190 bits (464), Expect = 4e-49
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TG+V
Sbjct: 138 QAVLSLYASGRTTGVV 153
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 186 bits (454), Expect = 7e-48
Identities = 83/90 (92%), Positives = 87/90 (96%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPK+NREKMTQIMFETFNTPAMYV I+
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQ 137
Score = 104 bits (249), Expect = 5e-23
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +1
Query: 106 DEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+EE+AALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 137 QAVLSLYASGRTTGIV 152
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 121 bits (292), Expect = 3e-28
Identities = 50/92 (54%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 GTEGS-YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 416
G +G ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 417 TEAPLNPKANREKMTQIMFETFNTPAMYVAIK 512
T+APLNP NRE+ +I FETFN PA+Y+ ++
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQ 141
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVG 240
+V+DNGSG+ KAGFA + P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYA+GR TG+V
Sbjct: 141 QAVLSLYATGRTTGVV 156
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 356
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 110 bits (265), Expect = 6e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD+EVAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 356
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 109 bits (262), Expect = 1e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD++VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 356
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 109 bits (262), Expect = 1e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
MCD++VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 347
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 228 RDGRYGTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 404
R G + VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 405 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 512
+LLTE PLNP +NREKM Q+MFE + ++YVA++
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQ 141
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRP 216
+VVDNG+G K G+A + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 434
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 435 PKANREKMTQIMFETFNTPAMYVAIK 512
NRE +IMFE+FN P +Y+A++
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQ 151
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIV 207
M ++ A V+DNG+G K G+A + P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +3
Query: 312 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 491
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 492 AMYVA 506
A Y++
Sbjct: 154 AYYLS 158
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 267 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 446
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 447 REKMTQIMFETF 482
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 267 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 446
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 447 REKMTQIMFETF 482
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 204 RGKAPPSGRDGRYGTEGSYVGDEAQSKRG 290
RGKA +GRDGR G EG+ Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -2
Query: 361 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPT*DPSVPYRPSRPDG 218
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 383 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 508
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 383 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 508
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 383 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 508
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 383 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 508
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 333 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 512
+WD +++ W + + L+V P V L PLN R + Q++ +N Y+ K
Sbjct: 116 SWDLLKEDWFNIYATSLKVWPFVQVVNLCFVPLN---YRVILNQVVAFFWNCYLSYITQK 172
Query: 513 P 515
P
Sbjct: 173 P 173
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 306 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 407
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 306 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 407
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U41263-12|AAO38594.1| 422|Caenorhabditis elegans Hypothetical
protein T19D12.2b protein.
Length = 422
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -1
Query: 374 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIRSFCPIPTITP*WRGLPTIEG 195
V G P+ L +IP D + + G S + +YI + P+P TP R +
Sbjct: 241 VNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVN-DIGNYIDAISPLPLATPDPRISDALTF 299
Query: 194 NTARGASSSAKPALHIPEPLSTTNAATSSSHIL 96
+A+ + ++K L + + NAA S++ L
Sbjct: 300 ISAQPTTLNSKVVLLVGSNGTNVNAAMDSANQL 332
>U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical
protein T19D12.2c protein.
Length = 516
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -1
Query: 374 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIRSFCPIPTITP*WRGLPTIEG 195
V G P+ L +IP D + + G S + +YI + P+P TP R +
Sbjct: 241 VNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVN-DIGNYIDAISPLPLATPDPRISDALTF 299
Query: 194 NTARGASSSAKPALHIPEPLSTTNAATSSSHIL 96
+A+ + ++K L + + NAA S++ L
Sbjct: 300 ISAQPTTLNSKVVLLVGSNGTNVNAAMDSANQL 332
>U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical
protein T19D12.2a protein.
Length = 610
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -1
Query: 374 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIRSFCPIPTITP*WRGLPTIEG 195
V G P+ L +IP D + + G S + +YI + P+P TP R +
Sbjct: 241 VNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVN-DIGNYIDAISPLPLATPDPRISDALTF 299
Query: 194 NTARGASSSAKPALHIPEPLSTTNAATSSSHIL 96
+A+ + ++K L + + NAA S++ L
Sbjct: 300 ISAQPTTLNSKVVLLVGSNGTNVNAAMDSANQL 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,590,058
Number of Sequences: 27780
Number of extensions: 310513
Number of successful extensions: 1234
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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