Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0201
(557 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 188 3e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 187 4e-48
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 187 4e-48
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 186 1e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 185 2e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 185 2e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 183 6e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 183 6e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 183 6e-47
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 5e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 157 5e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 156 8e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 99 1e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 96 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 86 1e-17
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 67 9e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 55 3e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 2e-05
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 29 2.1
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 29 2.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.1
At3g11402.1 68416.m01388 DC1 domain-containing protein contains ... 29 2.8
At3g48860.2 68416.m05337 expressed protein 28 3.7
At3g48860.1 68416.m05336 expressed protein 28 3.7
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 3.7
At1g43245.1 68414.m04985 expressed protein 28 3.7
At5g19470.1 68418.m02320 MutT/nudix family protein similar to SP... 28 4.9
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.9
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 6.4
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 8.5
At2g38460.1 68415.m04723 iron transporter-related contains tran... 27 8.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (457), Expect = 3e-48
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + +YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
E++ LV DNG+GM KAGFA DDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + +YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
E++ LV DNG+GM KAGFA DDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + +YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
E++ LV DNG+GM KAGFA DDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 83/90 (92%), Positives = 87/90 (96%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + +YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN PAMYVAI+
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQ 139
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
E++ LV DNG+GM KAGFA DDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 185 bits (450), Expect = 2e-47
Identities = 82/90 (91%), Positives = 86/90 (95%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + +YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN PAMYVAI+
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQ 139
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
E++ LV DNG+GM KAGFA DDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 185 bits (450), Expect = 2e-47
Identities = 82/90 (91%), Positives = 86/90 (95%)
Frame = +3
Query: 243 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 422
G + +YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 423 APLNPKANREKMTQIMFETFNTPAMYVAIK 512
APLNPKANREKMTQIMFETFN PAMYVAI+
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQ 139
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
E++ LV DNG+GM KAGFA DDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 183 bits (446), Expect = 6e-47
Identities = 80/86 (93%), Positives = 86/86 (100%)
Frame = +3
Query: 255 SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 434
+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLN
Sbjct: 54 AYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
Query: 435 PKANREKMTQIMFETFNTPAMYVAIK 512
PKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQ 139
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+++ +V DNG+GM KAGFA DDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 183 bits (446), Expect = 6e-47
Identities = 80/86 (93%), Positives = 86/86 (100%)
Frame = +3
Query: 255 SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 434
+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLN
Sbjct: 54 AYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
Query: 435 PKANREKMTQIMFETFNTPAMYVAIK 512
PKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQ 139
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+++ +V DNG+GM KAGFA DDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 183 bits (446), Expect = 6e-47
Identities = 80/86 (93%), Positives = 86/86 (100%)
Frame = +3
Query: 255 SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 434
+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLN
Sbjct: 54 AYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
Query: 435 PKANREKMTQIMFETFNTPAMYVAIK 512
PKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQ 139
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+++ +V DNG+GM KAGFA DDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLYASGR TGIV
Sbjct: 139 QAVLSLYASGRTTGIV 154
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (397), Expect = 5e-41
Identities = 68/86 (79%), Positives = 81/86 (94%)
Frame = +3
Query: 255 SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 434
++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLN
Sbjct: 55 TFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLN 114
Query: 435 PKANREKMTQIMFETFNTPAMYVAIK 512
PK NREKMTQIMFE+F P+MY+ I+
Sbjct: 115 PKVNREKMTQIMFESFAFPSMYIGIQ 140
Score = 84.6 bits (200), Expect = 4e-17
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQGVMVGMGQKD 255
+E A+V DNG+GM KAGFA DDAPRAVFPS+VGRPRH+GVMVGM +KD
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKD 54
Score = 30.7 bits (66), Expect = 0.69
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 509 QAVLSLYASGRXTGIV 556
QAVLSLY+SGR TGIV
Sbjct: 140 QAVLSLYSSGRTTGIV 155
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 157 bits (381), Expect = 5e-39
Identities = 72/95 (75%), Positives = 81/95 (85%)
Frame = +3
Query: 228 RDGRYGTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 407
RDG E SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNE-SYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 408 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 512
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV+++
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQ 128
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPR 219
+V D G GM +AGFA D+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 156 bits (379), Expect = 8e-39
Identities = 65/85 (76%), Positives = 80/85 (94%)
Frame = +3
Query: 258 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 437
+VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNP
Sbjct: 10 FVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNP 69
Query: 438 KANREKMTQIMFETFNTPAMYVAIK 512
KA+REKMTQIMFETF P+MY+ ++
Sbjct: 70 KADREKMTQIMFETFAVPSMYIGMQ 94
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 99 bits (238), Expect = 1e-21
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +3
Query: 261 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 440
VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP
Sbjct: 55 VGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPS 114
Query: 441 ANREKMTQIMFETFNTPAMYVAIK 512
NREKM + MFE +N +++ I+
Sbjct: 115 KNREKMIETMFEKYNFAGVFIQIQ 138
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRP--RHQGVMVGMGQKDLM 261
+V DNG+G K GFA ++ P +VFP +VGRP R++ ++ KD++
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIV 54
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 YVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 428
Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 429 LNPKANREKMTQIMFETFNTPAMYVAI 509
L P +RE +I+FETFN P +Y+A+
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAV 155
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 121 ALVVDNGSGMCKAGFAEDDAPRAVFPSIV 207
A+V+DNG+G K GFA + P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +3
Query: 258 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 434
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 435 PKANREKMTQIMFETFNTPAMYVAIKP 515
+ REK ++MFE + PA+++A P
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNP 162
Score = 53.6 bits (123), Expect = 9e-08
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVG 210
+EV+A+VVD GS CKAG+A +DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 66.9 bits (156), Expect = 9e-12
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 231 DGRYGTEGSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 407
D G Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 408 VLLTEAPLNPKANREK 455
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 54.0 bits (124), Expect = 6e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 109 EEVAALVVDNGSGMCKAGFAEDDAPRAVFPSIVG 210
+EV+A+VVD GS CKAG+A +DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 EGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEA 425
+GS D + +TL PIE G++ +WD ME + + Y L E +L T+
Sbjct: 38 DGSSSADNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDP 96
Query: 426 PLNPKANREKMTQIMFETFNTPAMYVA 506
PKA RE++ Q+MFETFN Y +
Sbjct: 97 LCTPKAIREQLVQLMFETFNVSGFYAS 123
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 121 ALVVDNGSGMCKAGFA-EDDAPRAVFPSIVGR 213
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +3
Query: 300 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 479
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 480 FNTPAMYVA 506
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRP 216
+V+DNG G+ KAG + P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 309 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 485
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 486 TPAM 497
PA+
Sbjct: 145 VPAV 148
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 124 LVVDNGSGMCKAGFAEDDAPRAVFPSIVGRPRHQ 225
+V+DNG+ + G+A + PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 240 YGTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 377
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 422 GSPQPQGQQREDDPDHV---RNIQHARHVRRHQAVLSLY 529
GSP+ +G + E+D D + NI+H + +H A LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 267 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 446
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 447 REK 455
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 267 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 446
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 447 REK 455
REK
Sbjct: 225 REK 227
>At3g11402.1 68416.m01388 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 708
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 453 KMTQIMFETFNTPAMYVAIKPCSRCTRPV 539
K+T+ F+TP ++ I PC C +PV
Sbjct: 322 KITRHQHRLFHTPYLHSTIPPCRICYKPV 350
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 200 EGNTARGASSSAKPALHIPEPLSTTNAATSSSH 102
E + R AS+S KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 200 EGNTARGASSSAKPALHIPEPLSTTNAATSSSH 102
E + R AS+S KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 198 LDRGKAPPSGRDGRYGTEGSYVGDEAQSKRGILTLK 305
L+RG+ S R GR S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 279 SVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSII 172
S PH L+ +L T+HH LMA PS H A + I
Sbjct: 96 SSPHRLNNLL---TNHHLLMADPSISVAIHHAANFI 128
>At5g19470.1 68418.m02320 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 365
Score = 27.9 bits (59), Expect = 4.9
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 254 SFCPIPTITP*WRGL-PTIEGNTARGASSSAKPALHIPEPLSTTNAATSSSHILN 93
S CP PT L PT++ R +SSS P LHI LS S S N
Sbjct: 7 SLCPTPTSLFSSHALIPTLQW---RSSSSSRSPPLHISRVLSVETVPLSPSFTWN 58
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 355 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 266
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 406 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*D 254
GC G T++ L C+ +S+ + TIP + Y + PL LC T D
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDD 504
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 416 H*GSPQPQGQQREDDPDHVRN 478
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g38460.1 68415.m04723 iron transporter-related contains
transmembrane domains; similar to iron-regulated
transporter IREG1 (GI:7264727) [Mus musculus]; similar
to ferroportin1 (GI:7109247) [Mus musculus]
Length = 524
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 281 ALCLISY-IRSFCPIPTITP*WRGLPTIEGNTARGASSSAKPALHIPEPLSTTNAAT 114
+L L+ + + SF + T T W G+PT RG S++ A + PL + +T
Sbjct: 320 SLALLFFTVLSFGTLMTATLQWEGIPTYIIGIGRGISATVGLAATLVYPLMQSRLST 376
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 333 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 482
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,967,643
Number of Sequences: 28952
Number of extensions: 292774
Number of successful extensions: 860
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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