Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0200
(552 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 30 0.012
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 1.3
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 23 1.3
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 4.1
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 9.5
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 9.5
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 9.5
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 9.5
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 30.3 bits (65), Expect = 0.012
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +2
Query: 293 AGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFEL 472
AG+L+ + K D G+Y C + G S T L T E + T+ G+P
Sbjct: 289 AGTLIIREAKVEDSGKYLCVVNNSVGGESVE-TVLTVTAPLKAKIEPQVQTIDFGRPATF 347
Query: 473 RC 478
C
Sbjct: 348 TC 349
Score = 28.7 bits (61), Expect = 0.036
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 302 LVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETP----AFEEKKVTVVEGKPFE 469
L + D+G YQCF ++D A A E P AF E+ TV G
Sbjct: 375 LRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEE--TVQPGNSVF 432
Query: 470 LRCPVPXGYPKP 505
L+C + G P P
Sbjct: 433 LKC-IASGNPTP 443
Score = 27.5 bits (58), Expect = 0.082
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 296 GSLVFSQT-KASDEGEYQCFAKSDFGVASTRATKLR-RTYIETPAFEEKKVTVVEGKPFE 469
G+L+ +ASD+ Y C AK+ G ++ + +++ + F+ + ++ EG
Sbjct: 563 GTLIIENVERASDQATYDCVAKNSQGYSARGSLEVQVMVPPQILPFDFGEDSINEGDGVS 622
Query: 470 LRCPVPXG-YP 499
++C V G YP
Sbjct: 623 VQCTVSKGDYP 633
Score = 26.2 bits (55), Expect = 0.19
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 296 GSLVFSQTKASDEGEYQCFAKSDFG 370
GSL ++ GEY C ++D+G
Sbjct: 1359 GSLFIRDVSRNNAGEYSCHVENDYG 1383
Score = 25.0 bits (52), Expect = 0.44
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 287 IDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEK--KVTVVEGK 460
++ G+L + + ++EG Y C A + G+ S + ++ + P F+ K T G
Sbjct: 755 VEDGTLTINNIQKTNEGYYLCEAVN--GIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGD 812
Query: 461 PFELRC 478
P L+C
Sbjct: 813 PAVLQC 818
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +2
Query: 302 LVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETP 421
L +T+ SD + C A + FG T + + E P
Sbjct: 860 LSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVP 899
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 19 RLRSFSKFQNQNEFLDVISFGNMCYLH 99
RL+ + N+ F ISF +CYLH
Sbjct: 207 RLKPEGRISNRRVF---ISFSKICYLH 230
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 19 RLRSFSKFQNQNEFLDVISFGNMCYLH 99
RL+ + N+ F ISF +CYLH
Sbjct: 225 RLKPEGRISNRRVF---ISFSKICYLH 248
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 465 KGFPSTTVTFFSSNAG 418
+G+P+ TVT N+G
Sbjct: 390 QGYPTNTVTILGPNSG 405
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 74 VLGTCVIYTTGQPV 115
V GTC+I TG+ +
Sbjct: 238 VFGTCLILITGKSI 251
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 74 VLGTCVIYTTGQPV 115
V GTC+I TG+ +
Sbjct: 238 VFGTCLILITGKSI 251
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 67 RPGIHFDSETLKNFAICVVL 8
RP I+F S+TL I +++
Sbjct: 486 RPSIYFISKTLAESPIFIII 505
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 67 RPGIHFDSETLKNFAICVVL 8
RP I+F S+TL I +++
Sbjct: 486 RPSIYFISKTLAESPIFIII 505
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,008
Number of Sequences: 336
Number of extensions: 2156
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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