Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0200
(552 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 34 8e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 34 8e-04
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 32 0.004
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 34.3 bits (75), Expect = 8e-04
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = +2
Query: 311 SQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPVPX 490
S D GEY C A++ G T A +L Y KVT V G+ L+CPV
Sbjct: 487 SHVMVEDGGEYSCMAENRAGKV-THAARLN-VYGLPYIRLIPKVTAVAGETLRLKCPV-A 543
Query: 491 GYP 499
GYP
Sbjct: 544 GYP 546
Score = 29.5 bits (63), Expect = 0.024
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 296 GSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELR 475
G+L+ K EG Y C A + G + +L+ A + VTV +G L
Sbjct: 769 GTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLH 828
Query: 476 CPVPXGYP 499
C V P
Sbjct: 829 CEVHGDTP 836
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 302 LVFSQTKASDEGEYQCFAKSDFG 370
L S +ASD G Y C A + +G
Sbjct: 872 LQISSAEASDSGAYFCQASNLYG 894
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = +3
Query: 177 GQAXRLECAXXGXDSGVXYSWRKDG 251
G R C D + SW KDG
Sbjct: 625 GMRTRTVCGVAAGDPPLTISWLKDG 649
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 34.3 bits (75), Expect = 8e-04
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = +2
Query: 311 SQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPVPX 490
S D GEY C A++ G T A +L Y KVT V G+ L+CPV
Sbjct: 487 SHVMVEDGGEYSCMAENRAGKV-THAARLN-VYGLPYIRLIPKVTAVAGETLRLKCPV-A 543
Query: 491 GYP 499
GYP
Sbjct: 544 GYP 546
Score = 29.5 bits (63), Expect = 0.024
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 296 GSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELR 475
G+L+ K EG Y C A + G + +L+ A + VTV +G L
Sbjct: 765 GTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLH 824
Query: 476 CPVPXGYP 499
C V P
Sbjct: 825 CEVHGDTP 832
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 302 LVFSQTKASDEGEYQCFAKSDFG 370
L S +ASD G Y C A + +G
Sbjct: 868 LQISSAEASDSGAYFCQASNLYG 890
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 177 GQAXRLECAXXGXDSGVXYSWRKDG 251
G+ L C+ D + SW KDG
Sbjct: 625 GERTTLTCSVTRGDLPLSISWLKDG 649
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 31.9 bits (69), Expect = 0.004
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 272 DTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFG 370
D L + GSL + +D GEY C+ ++ FG
Sbjct: 1321 DRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFG 1353
Score = 29.9 bits (64), Expect = 0.018
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +2
Query: 287 IDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEE--KKVTVVEGK 460
++ L K D+G YQCF ++D A A E P + + T+ G
Sbjct: 350 LEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGP 409
Query: 461 PFELRCPVPXGYPKP 505
L+C V G P P
Sbjct: 410 SMFLKC-VASGNPTP 423
Score = 28.7 bits (61), Expect = 0.041
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 293 AGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFEL 472
+G+L+ + + D G+Y C + G S T L T E T+ G+P
Sbjct: 269 SGTLIIREARVEDSGKYLCIVNNSVGGESVE-TVLTVTAPLGAEIEPSTQTIDFGRPATF 327
Query: 473 RCPV 484
C V
Sbjct: 328 TCNV 331
Score = 24.2 bits (50), Expect = 0.89
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 284 TIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFE--EKKVTVVEG 457
+++ G+L + + ++EG Y C A + G+ + + + + P FE K T G
Sbjct: 734 SVEDGTLSINNIQKTNEGYYLCEAVN--GIGAGLSAVIFISVQAPPHFEIKLKNQTARRG 791
Query: 458 KPFELRC 478
+P L+C
Sbjct: 792 EPAVLQC 798
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +2
Query: 302 LVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETP 421
L +T+ SD + C A + FG T + + E P
Sbjct: 840 LSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVP 879
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,947
Number of Sequences: 438
Number of extensions: 2357
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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