Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0200
(552 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14780.1 68417.m02273 protein kinase, putative similar to pro... 29 1.6
At5g32470.1 68418.m03828 expressed protein 29 2.1
At3g22750.1 68416.m02869 protein kinase, putative similar to pro... 29 2.1
At3g22700.1 68416.m02864 F-box family protein contains Pfam:PF00... 29 2.7
At3g22350.1 68416.m02822 F-box family protein similar to F-box p... 29 2.7
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 28 3.6
At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identic... 28 3.6
At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identic... 28 3.6
At5g13520.1 68418.m01561 peptidase M1 family protein similar to ... 28 4.8
At4g15500.1 68417.m02368 UDP-glucoronosyl/UDP-glucosyl transfera... 28 4.8
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 27 8.3
At5g37430.1 68418.m04503 hypothetical protein contains Pfam PF04... 27 8.3
>At4g14780.1 68417.m02273 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 364
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 359 SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 484
+DFGVA A + ET V++GKP+ RC V
Sbjct: 223 ADFGVARVEALNPKDMTGETGTLGYMAPEVIDGKPYNRRCDV 264
>At5g32470.1 68418.m03828 expressed protein
Length = 575
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 221 WCRXLVAKRRXDFSVGLDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLR 400
WC L+ R FS G + A F ++ ++ G+ C ++D G+ + ++ LR
Sbjct: 464 WCGDLI---RAAFSAGGVDAVEVHANEFTFEESIST--GDLLCLLEADIGIVVSSSSSLR 518
Query: 401 R 403
R
Sbjct: 519 R 519
>At3g22750.1 68416.m02869 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 378
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 338 EYQCFAK-SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 484
+YQ K +DFGVA A + ET V++GKP+ RC V
Sbjct: 229 DYQRNLKIADFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRRCDV 278
>At3g22700.1 68416.m02864 F-box family protein contains Pfam:PF00646
F-box domain
Length = 338
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 520 SSSLGRLRVAXGHWTAEFKGFSFDHRHFFLLKCRSLYVRTAELS-SPCAGDPKVAFGEAL 344
++SL RLR W A K F +HF SL + E+S + P + F +AL
Sbjct: 18 ATSLKRLRSTCRQWNALLKDRRFTEKHFRKAPKESLVLMLKEISVNLNVTPPSIEFKDAL 77
Query: 343 VL 338
L
Sbjct: 78 GL 79
>At3g22350.1 68416.m02822 F-box family protein similar to F-box
protein family, AtFBX9 (GI:20197985) [Arabidopsis
thaliana]; contains Pfam PF00646: F-box domain; contains
TIGRFAM TIGR01640 : F-box protein interaction domain
Length = 378
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 520 SSSLGRLRVAXGHWTAEFKGFSFDHRHFFLLKCRSLYVRTAE 395
++SL RLR W FK SF +HF + S+ + E
Sbjct: 18 ATSLKRLRSTCKQWNTLFKKRSFSQKHFHIAPKESMVLMLKE 59
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = -1
Query: 336 PSSEALVWLNTREPASIV 283
P+S+ + WL++REP+S+V
Sbjct: 266 PASDCMEWLDSREPSSVV 283
>At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identical
to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 344
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 359 SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 484
+DFGVA A + ET V+EGKP+ +C V
Sbjct: 250 ADFGVARVEAQNPQDMTGETGTLGYMAPEVLEGKPYNRKCDV 291
>At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identical
to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 391
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 359 SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 484
+DFGVA A + ET V+EGKP+ +C V
Sbjct: 250 ADFGVARVEAQNPQDMTGETGTLGYMAPEVLEGKPYNRKCDV 291
>At5g13520.1 68418.m01561 peptidase M1 family protein similar to
SP|P09960 Leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4
hydrolase) {Homo sapiens}; contains Pfam profile
PF01433: Peptidase family M1
Length = 616
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 405 VRRSLVALVLATPKSLLAKHWYSPSSEALVWLN 307
+R + V +VL+ SLL + SPS+ AL WL+
Sbjct: 81 IRGTEVVVVLSGQSSLLIVYSTSPSASALQWLS 113
>At4g15500.1 68417.m02368 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 475
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 336 PSSEALVWLNTREPASIV 283
P S+ + WL++REP+S+V
Sbjct: 262 PDSDCIEWLDSREPSSVV 279
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 227 RXLVAKRRXDFSVGLDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRT 406
+ +V + S+ ++ TI+ +L Q K + EY KS + STR K
Sbjct: 97 KKIVVDLEEENSIESESDITIEESALCLLQMKDDNMSEYLQNLKSIDSLVSTRKRKDTEN 156
Query: 407 YIETPAFE 430
YIE + E
Sbjct: 157 YIEIDSDE 164
>At5g37430.1 68418.m04503 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 607
Score = 27.1 bits (57), Expect = 8.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 487 RXLPEADLSWMRHHDEDG 540
+ LPE + W+ HD+DG
Sbjct: 540 KQLPETEFDWLNLHDDDG 557
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,818,348
Number of Sequences: 28952
Number of extensions: 202825
Number of successful extensions: 629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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