Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0199
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    24   3.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.7  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 181 GHEAGVRHRGRRQXCRILVAKRRHAFS 261
           G   GV +RG+ Q CR   A   H  +
Sbjct: 15  GEVTGVSYRGQAQTCRNCAAPVHHGLN 41


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 379  CWRPXSRFWRSTGT 338
            CW P    WRS+ T
Sbjct: 2760 CWNPLKWDWRSSST 2773


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,081
Number of Sequences: 2352
Number of extensions: 10219
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)