Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0199
(539 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 28 0.070
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.12
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.37
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.6
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 23 2.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 8.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 8.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.9 bits (59), Expect = 0.070
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 134 PVLKEAPAEVLFREGQATRLECATEGDDSXVEYSWRKDG 250
P+++ + EG TR C D + SW KDG
Sbjct: 611 PIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDG 649
Score = 24.2 bits (50), Expect = 0.86
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 436 KVTVVEGKPFELRCPVFXGY 495
KVT V G+ L+CPV GY
Sbjct: 527 KVTAVAGETLRLKCPV-AGY 545
Score = 22.2 bits (45), Expect = 3.5
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = +1
Query: 295 GSLVFSQTKASDEGEXQCFAKSDFXVASTRATXLRRTYIETPAFEEKKVTVVEGKPFELR 474
G+L+ K EG C A + + L+ A + VTV +G L
Sbjct: 769 GTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLH 828
Query: 475 CPV 483
C V
Sbjct: 829 CEV 831
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.1 bits (57), Expect = 0.12
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 241 KRRHAFSVGLDTLTTIDAGSLVFSQTKASDEGEXQCFAKSDF 366
K R A D L + GSL + +D GE C+ ++ F
Sbjct: 1311 KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTF 1352
Score = 24.2 bits (50), Expect = 0.86
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 286 IDAGSLVFSQTKASDEGEXQCFAKSDFXVASTRATXLRRTYIETPAFEE--KKVTVVEGK 459
++ L K D+G QCF ++D A A E P + + T+ G
Sbjct: 350 LEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGP 409
Query: 460 PFELRC 477
L+C
Sbjct: 410 SMFLKC 415
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 176 GQATRLECATEGDDSXVEYSWRKDG 250
G+ T L C+ D + SW KDG
Sbjct: 625 GERTTLTCSVTRGDLPLSISWLKDG 649
Score = 24.2 bits (50), Expect = 0.86
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 436 KVTVVEGKPFELRCPVFXGY 495
KVT V G+ L+CPV GY
Sbjct: 527 KVTAVAGETLRLKCPV-AGY 545
Score = 22.2 bits (45), Expect = 3.5
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = +1
Query: 295 GSLVFSQTKASDEGEXQCFAKSDFXVASTRATXLRRTYIETPAFEEKKVTVVEGKPFELR 474
G+L+ K EG C A + + L+ A + VTV +G L
Sbjct: 765 GTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLH 824
Query: 475 CPV 483
C V
Sbjct: 825 CEV 827
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 98 TTGQPVNSGDKVPVLKEAPAEVLFRE 175
T G G K+PV AP + FR+
Sbjct: 789 TEGAYTTRGGKIPVRWTAPEAIAFRK 814
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -2
Query: 235 RVFDTTVVSLCGALQPRGLSLSEQYLGRCLLENGNLVSGINGLPRSVN 92
++FD ++ L +Q + ++ + ++ N N SG+N LP + N
Sbjct: 110 KIFDINLLGLTCMIQEVLKLMKKKGINNGIIVNINDASGLNLLPMNRN 157
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 347 HWXSPSSEALVWLNT 303
++ SPSSE L ++NT
Sbjct: 265 YYNSPSSENLYYVNT 279
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 8.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 491 PXXTGQRSSKGFPSTTVTFFSSNAGVSM 408
P G SS PS+ +FFSS + S+
Sbjct: 81 PSYPGGGSSSPSPSSPSSFFSSVSPTSL 108
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 111 PLIPETRFPFSRRHRPRY 164
P P F +RH PRY
Sbjct: 142 PGTPRINFTKLKRHHPRY 159
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,492
Number of Sequences: 438
Number of extensions: 2583
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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