Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0198
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 171 2e-43
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 171 3e-43
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 171 4e-43
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 169 1e-42
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 3e-42
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 8e-41
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 3e-36
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 8e-32
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 131 3e-31
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 129 2e-30
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 127 7e-30
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 3e-24
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 98 5e-21
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 97 6e-21
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 97 8e-21
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 94 6e-20
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 8e-20
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 82 3e-16
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 81 6e-16
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 7e-07
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 42 3e-04
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 40 0.001
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 28 4.4
SB_48626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 171 bits (417), Expect = 2e-43
Identities = 80/94 (85%), Positives = 81/94 (86%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK IVDLVLDRIR LADQCTGLQGFLIFHSFG
Sbjct: 173 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 206
Score = 170 bits (413), Expect = 7e-43
Identities = 77/94 (81%), Positives = 81/94 (86%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++DLVLDRIR LADQCTGLQGFLIFHSFG
Sbjct: 694 TVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFG 727
Score = 131 bits (316), Expect = 4e-31
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2
Query: 77 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGV 256
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 257 ASTYP 271
P
Sbjct: 123 GKHVP 127
Score = 130 bits (314), Expect = 7e-31
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 263 TYP 271
P
Sbjct: 646 HVP 648
Score = 130 bits (313), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 266 YP 271
P
Sbjct: 574 VP 575
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPT 300
F F +GKHVPRAVFVDLEPT
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPT 585
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 208 GTGSGFSSLLMER 220
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 729 GTGSGFSSLLMER 741
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 171 bits (416), Expect = 3e-43
Identities = 79/94 (84%), Positives = 81/94 (86%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK IVDLVLDRIR LADQCTGLQGFLIFHSFG
Sbjct: 542 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 575
Score = 171 bits (415), Expect = 4e-43
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT VD VRTGTYRQLFHPEQ + GKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK IVDLVLDRIR LADQCTGLQGFLIFHSFG
Sbjct: 109 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 142
Score = 132 bits (318), Expect = 2e-31
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 130 bits (313), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 266 YP 271
P
Sbjct: 495 VP 496
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 144 GTGSGFSSLLMER 156
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 577 GTGSGFSSLLMER 589
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 171 bits (415), Expect = 4e-43
Identities = 78/94 (82%), Positives = 81/94 (86%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK I+DLVLDRIR LADQCTGLQGFLIFHSFG
Sbjct: 108 TVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFG 141
Score = 130 bits (313), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 266 YP 271
P
Sbjct: 61 VP 62
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 143 GTGSGFTSLLMER 155
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 169 bits (411), Expect = 1e-42
Identities = 78/94 (82%), Positives = 80/94 (85%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK I+DLVLDR R LADQCTGLQGFLIFHSFG
Sbjct: 109 TIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFG 142
Score = 130 bits (315), Expect = 6e-31
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF SLLMER
Sbjct: 144 GTGSGFASLLMER 156
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 168 bits (408), Expect = 3e-42
Identities = 76/94 (80%), Positives = 80/94 (85%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVF DLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++DLVLDRIR LADQCTGLQGFLIFHSFG
Sbjct: 913 TVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFG 946
Score = 163 bits (395), Expect = 1e-40
Identities = 73/94 (77%), Positives = 79/94 (84%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT +D VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK +D+VLDR+R LAD CTGLQGFLIFHSFG
Sbjct: 480 TVGKEQIDIVLDRLRKLADGCTGLQGFLIFHSFG 513
Score = 129 bits (311), Expect = 2e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 266 YP 271
P
Sbjct: 866 VP 867
Score = 127 bits (307), Expect = 5e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETG
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 266 YP 271
P
Sbjct: 433 VP 434
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 515 GTGSGFTSLLMER 527
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 948 GTGSGFTSLLMER 960
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 165 bits (400), Expect = 3e-41
Identities = 73/94 (77%), Positives = 80/94 (85%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVF DLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++++VLDR+R LADQCTGLQGFLIFHSFG
Sbjct: 94 TVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFG 127
Score = 161 bits (390), Expect = 5e-40
Identities = 71/94 (75%), Positives = 79/94 (84%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEP+ +D +RTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK +D VLDRIR LADQC+GLQGFL+FHSFG
Sbjct: 527 TVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFG 560
Score = 128 bits (309), Expect = 3e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 266 YP 271
P
Sbjct: 480 VP 481
Score = 99 bits (238), Expect = 1e-21
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +2
Query: 128 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVASTYP 271
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 129 GTGSGFSSLLMER 141
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 165 bits (400), Expect = 3e-41
Identities = 73/94 (77%), Positives = 80/94 (85%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT +D +RTGTYRQLFHPEQ ++GKEDAANNYARGHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK +DL LDRIR LADQCTGLQGFLIFHSFG
Sbjct: 74 TVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFG 107
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 188 MPTDKTIGGGDDSFNTFFSETGVASTYP 271
MP+DKTIGGGDDSFNTFF+ETG P
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 109 GTGSGFSSLLMER 121
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 163 bits (396), Expect = 8e-41
Identities = 74/94 (78%), Positives = 78/94 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SGKHVPRAVF DLEPT VD VRTGTYRQLFHPEQ I GKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D VLDR+R LAD CTGLQGFLIFHSFG
Sbjct: 109 TVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFG 142
Score = 130 bits (314), Expect = 7e-31
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 144 GTGSGFSSLLMER 156
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 148 bits (358), Expect = 3e-36
Identities = 64/85 (75%), Positives = 76/85 (89%)
Frame = +1
Query: 253 SGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDL 432
+GK+VPRAV VDLEPT +D VRTG YR L+HPEQ I+GKEDAANNYARGHYTIGK +V++
Sbjct: 969 AGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEV 1028
Query: 433 VLDRIRXLADQCTGLQGFLIFHSFG 507
V+D+IR + DQC+GLQGFLIFHSFG
Sbjct: 1029 VMDKIRKMTDQCSGLQGFLIFHSFG 1053
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 133 bits (322), Expect = 8e-32
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +1
Query: 307 DXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVLDRIRXLADQCTGLQGF 486
D VRTGTYRQLFHPEQ I GKEDAANNYARGHYT+GK ++DLVLDRIR LADQCTGLQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 487 LIFHSFG 507
LIFHSFG
Sbjct: 73 LIFHSFG 79
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 81 GTGSGFSSLLMER 93
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 131 bits (317), Expect = 3e-31
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +1
Query: 313 VRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVLDRIRXLADQCTGLQGFLI 492
VRTGTYRQLFHPEQ I GKEDAANNYARGHYT+GK ++DLVLDRIR LADQCTGLQGFLI
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 493 FHSFG 507
FHSFG
Sbjct: 63 FHSFG 67
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 69 GTGSGFSSLLMER 81
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 129 bits (311), Expect = 2e-30
Identities = 55/63 (87%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 124 bits (298), Expect = 6e-29
Identities = 63/94 (67%), Positives = 66/94 (70%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPT V PEQ I GKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK VD VLDR+R LADQC+GLQGF IFHSFG
Sbjct: 99 TIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFG 132
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 134 GTGSGFSSLLMER 146
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 128 bits (309), Expect = 3e-30
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVR 318
F F GKHVPRAVFVDLEP+ V ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 127 bits (306), Expect = 7e-30
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +1
Query: 313 VRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVLDRIRXLADQCTGLQGFLI 492
+RTGTYRQLFHPEQ ++GKEDAANNYARGHYT+GK +DL LDRIR LADQCTGLQGFLI
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 493 FHSFG 507
FHSFG
Sbjct: 63 FHSFG 67
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 69 GTGSGFSSLLMER 81
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 108 bits (259), Expect = 3e-24
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 250
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSET 251
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 457 ADQCTGLQGFLIFHSFG 507
ADQCTGLQGFL+FHSFG
Sbjct: 257 ADQCTGLQGFLVFHSFG 273
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 275 GTGSGFSSLLMER 287
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 97.9 bits (233), Expect = 5e-21
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +VD V
Sbjct: 270 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 329
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LD +R A+ C LQGF + HS G
Sbjct: 330 LDVVRKEAESCDCLQGFQLTHSLG 353
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 68 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
K KMRE + GQ G QIG WE+ EHGI P G D +
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 255
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 97.5 bits (232), Expect = 6e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +VD V
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 116
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LD +R A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAESCDCLQGFQLTHSLG 140
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE + GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LD +R A+ C +QGF + HS G
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLG 85
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 94.3 bits (224), Expect = 6e-20
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
GK+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G ++D V
Sbjct: 57 GKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSV 116
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LD +R A+ C +QGF + HS G
Sbjct: 117 LDVVRKEAESCDCIQGFQLTHSLG 140
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE +S+ GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 93.9 bits (223), Expect = 8e-20
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = +1
Query: 313 VRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVLDRIRXL 456
VRTGTYRQLFHPEQ I GKEDAANNYARGHYT+GK ++DLVLDRIR L
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 313 VRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVLDRIRXL 456
VR GTYR LFHP+Q I GKEDAANNYARGHYT+GK +DL L++IR L
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 81.0 bits (191), Expect = 6e-16
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
G++VPR++ VDLEP +D VR G +F P+ +N + AANN+A+GHY+ G ++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
D +R A+ C +QG + + G
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALG 96
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +1
Query: 367 KEDAANNYARGHYTIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
+ AANN+A+G YT G ++D +D IR LA+ C +QGF I HS G
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLG 48
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXI 360
GK+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE + GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 457 ADQCTGLQGFLIFHSFG 507
ADQCTGLQGFLIFHSFG
Sbjct: 1 ADQCTGLQGFLIFHSFG 17
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 19 GTGSGFSSLLMER 31
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEP-----TXVDXVRTGTYRQLFHPEQXINGKEDAANNYARG 399
F R+ RAV +D+E T + ++GT+R + Q + K + NN+A G
Sbjct: 55 FFTRENDDILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHG 112
Query: 400 HYTIGKXIVDLVLDRIRXLADQCTGLQGFL 489
G +D VLD ++ ++C L GFL
Sbjct: 113 FSEHGPKSIDKVLDLVQREVEKCDRLDGFL 142
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 143 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 218 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 108
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +1
Query: 358 INGKEDAANNYARGHY--TI---GKXIVDLVLDRIRXLADQCTGLQGFLIFHS 501
I G+ NN+A G++ +I G ++ + +D +R ++C G ++ HS
Sbjct: 70 IAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGTIVMHS 122
>SB_48626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 256 HSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD-LDSGLANVYRYALTHF 80
HS A V + S+ D +CG + + V++ + P +TD + + LAN ++ H
Sbjct: 23 HSDWASSIVPVVKSSGDIRLCGDYKVTIKKVVKQDRYPLPLTDEILANLANGEKFTKLHL 82
Query: 79 DLSF 68
++
Sbjct: 83 SQAY 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,543,222
Number of Sequences: 59808
Number of extensions: 367045
Number of successful extensions: 901
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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