Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0198
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 162 2e-40
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 162 2e-40
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 162 2e-40
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 162 2e-40
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 154 5e-38
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 154 5e-38
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 154 5e-38
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 153 8e-38
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 153 1e-37
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 153 1e-37
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 149 1e-36
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 149 1e-36
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 146 7e-36
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 144 4e-35
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 144 4e-35
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 98 3e-21
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 98 3e-21
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 97 6e-21
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 95 2e-20
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 93 9e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 93 9e-20
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 84 7e-17
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 84 7e-17
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 45 4e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 45 4e-05
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 72/94 (76%), Positives = 77/94 (81%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SG+HVPRAV VDLEPT +D +RTGTYR LFHPEQ I GKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK I+DL LDRIR LAD CTGLQGFL+FHSFG
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFG 142
Score = 119 bits (287), Expect = 1e-27
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 144 GTGSGFTSLLMER 156
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 162 bits (393), Expect = 2e-40
Identities = 72/94 (76%), Positives = 77/94 (81%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SG+HVPRAV VDLEPT +D +RTGTYR LFHPEQ I GKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK I+DL LDRIR LAD CTGLQGFL+FHSFG
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFG 141
Score = 117 bits (282), Expect = 5e-27
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 266 YP 271
P
Sbjct: 61 VP 62
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 143 GTGSGFTSLLMER 155
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 72/94 (76%), Positives = 77/94 (81%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SG+HVPRAV VDLEPT +D +RTGTYR LFHPEQ I GKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK I+DL LDRIR LAD CTGLQGFL+FHSFG
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFG 142
Score = 119 bits (287), Expect = 1e-27
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 144 GTGSGFTSLLMER 156
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 72/94 (76%), Positives = 77/94 (81%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SG+HVPRAV VDLEPT +D +RTGTYR LFHPEQ I GKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK I+DL LDRIR LAD CTGLQGFL+FHSFG
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFG 142
Score = 119 bits (287), Expect = 1e-27
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 144 GTGSGFTSLLMER 156
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 154 bits (373), Expect = 5e-38
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SG++VPR++FVDLEPT VD +RTGTY++LFHPEQ I GKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D VLDRIR LAD C+GLQGF +FHSFG
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFG 140
Score = 100 bits (239), Expect = 8e-22
Identities = 46/63 (73%), Positives = 49/63 (77%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 142 GTGSGFTSLLMER 154
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 154 bits (373), Expect = 5e-38
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
+ F SGKHVPRA+FVDLEPT +D VRTGTY +LFHPEQ I+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK ++D+V+DR+R L ++C LQGFLIFHSFG
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFG 142
Score = 100 bits (240), Expect = 6e-22
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 250
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSET 56
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSL+MER
Sbjct: 144 GTGSGFTSLVMER 156
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 154 bits (373), Expect = 5e-38
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F SG++VPR++FVDLEPT VD +RTGTY++LFHPEQ I GKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D VLDRIR LAD C+GLQGF +FHSFG
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFG 140
Score = 100 bits (239), Expect = 8e-22
Identities = 46/63 (73%), Positives = 49/63 (77%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 142 GTGSGFTSLLMER 154
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 153 bits (371), Expect = 8e-38
Identities = 64/94 (68%), Positives = 76/94 (80%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +GKHVPRA+ VDLEPT +D +RTGTY+ LFHPEQ + GKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
TIGK I+D+V+DR+R L + C GLQGFL+FHSFG
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFG 147
Score = 100 bits (240), Expect = 6e-22
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +2
Query: 80 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVA 259
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 260 STYP 271
P
Sbjct: 65 KHVP 68
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFT+LLMER
Sbjct: 149 GTGSGFTALLMER 161
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 153 bits (370), Expect = 1e-37
Identities = 65/94 (69%), Positives = 78/94 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +G++VPR++FVDLEPT VD +RTGTY++LFHPEQ I GKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D VLDRIR LAD C+GLQGF +FHSFG
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFG 140
Score = 99 bits (238), Expect = 1e-21
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 253
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTG 55
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 142 GTGSGFTSLLMER 154
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 153 bits (370), Expect = 1e-37
Identities = 65/94 (69%), Positives = 78/94 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +G++VPR++FVDLEPT VD +RTGTY++LFHPEQ I GKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D VLDRIR LAD C+GLQGF +FHSFG
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFG 140
Score = 99 bits (238), Expect = 1e-21
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 253
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTG 55
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 142 GTGSGFTSLLMER 154
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 149 bits (361), Expect = 1e-36
Identities = 63/94 (67%), Positives = 76/94 (80%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +G++VPR++FVDLEPT VD +RTG Y++LFHPEQ I GKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D LDRIR LAD C+GLQGF +FHSFG
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFG 140
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 253
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTG 55
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 142 GTGSGFTSLLMER 154
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 149 bits (361), Expect = 1e-36
Identities = 63/94 (67%), Positives = 76/94 (80%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHY 405
F F +G++VPR++FVDLEPT VD +RTG Y++LFHPEQ I GKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
T+GK ++D LDRIR LAD C+GLQGF +FHSFG
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFG 140
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 253
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTG 55
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTSLLMER
Sbjct: 142 GTGSGFTSLLMER 154
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 148 bits (359), Expect = 2e-36
Identities = 63/93 (67%), Positives = 74/93 (79%)
Frame = +1
Query: 229 QHFLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYT 408
Q F +GKHVPRA++VDLEPT +D +R G Y LFHP+Q INGKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 409 IGKXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
IGK ++D+VLDRIR + C GLQGFL+FHSFG
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFHSFG 145
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 250
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSES 59
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF+SLLMER
Sbjct: 147 GTGSGFSSLLMER 159
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 146 bits (355), Expect = 7e-36
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
G+HVPR++FVDLEPT VD +RTG Y++LFHPEQ + GKEDAANNYARGHYT+GK I+D
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTT 115
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LDRIR LA+ C GLQGF +FHSFG
Sbjct: 116 LDRIRRLANNCEGLQGFFVFHSFG 139
Score = 86.6 bits (205), Expect = 1e-17
Identities = 41/63 (65%), Positives = 43/63 (68%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 263 TYP 271
P
Sbjct: 58 HVP 60
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGFTS+LMER
Sbjct: 141 GTGSGFTSMLMER 153
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 144 bits (349), Expect = 4e-35
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIG 414
F GKHVPR +FVDLEPT VD VRTGTYR LFHPEQ ++GKEDAAN YARG YTIG
Sbjct: 58 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 117
Query: 415 KXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
+ ++D+V+DR++ LA+ C GLQGF+IFHSFG
Sbjct: 118 REMIDVVMDRVKRLAENCNGLQGFVIFHSFG 148
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 266 YP 271
P
Sbjct: 68 VP 69
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF SLLMER
Sbjct: 150 GTGSGFLSLLMER 162
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 144 bits (349), Expect = 4e-35
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIG 414
F GKHVPR +FVDLEPT VD VRTGTYR LFHPEQ ++GKEDAAN YARG YTIG
Sbjct: 30 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 89
Query: 415 KXIVDLVLDRIRXLADQCTGLQGFLIFHSFG 507
+ ++D+V+DR++ LA+ C GLQGF+IFHSFG
Sbjct: 90 REMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Score = 44.4 bits (100), Expect = 5e-05
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 149 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVASTYP 271
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 510 GTGSGFTSLLMER 548
GTGSGF SLLMER
Sbjct: 122 GTGSGFLSLLMER 134
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = +1
Query: 253 SGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDL 432
+GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G +VD
Sbjct: 56 NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 433 VLDRIRXLADQCTGLQGFLIFHSFG 507
VLD IR A+ C LQGF + HS G
Sbjct: 116 VLDVIRKEAEGCDCLQGFQLTHSLG 140
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 184
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = +1
Query: 253 SGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDL 432
+GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G +VD
Sbjct: 56 NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 433 VLDRIRXLADQCTGLQGFLIFHSFG 507
VLD IR A+ C LQGF + HS G
Sbjct: 116 VLDVIRKEAEGCDCLQGFQLTHSLG 140
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 184
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 97.5 bits (232), Expect = 6e-21
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G +VD V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LD +R A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAEGCDCLQGFQLTHSLG 140
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 184
MRE + V GQ G QIG WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDG 34
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 95.5 bits (227), Expect = 2e-20
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLV 435
GK+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G +VD V
Sbjct: 57 GKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 436 LDRIRXLADQCTGLQGFLIFHSFG 507
LD +R A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAESCDCLQGFQMTHSLG 140
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 93.5 bits (222), Expect = 9e-20
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = +1
Query: 253 SGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDL 432
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G +VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 433 VLDRIRXLADQCTGLQGFLIFHSFG 507
VLD +R A+ LQGF + HS G
Sbjct: 116 VLDVVRKEAESTDCLQGFQLTHSLG 140
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 253
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAG 55
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 93.5 bits (222), Expect = 9e-20
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = +1
Query: 253 SGKHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDL 432
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G +VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 433 VLDRIRXLADQCTGLQGFLIFHSFG 507
VLD +R A+ LQGF + HS G
Sbjct: 116 VLDVVRKEAESTDCLQGFQLTHSLG 140
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 253
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAG 55
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 83.8 bits (198), Expect = 7e-17
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +1
Query: 259 KHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVL 438
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G IVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 439 DRIRXLADQCTGLQGFLIFHSFG 507
IR A+ L+GF + HS G
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLG 140
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 199
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 83.8 bits (198), Expect = 7e-17
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +1
Query: 259 KHVPRAVFVDLEPTXVDXVRTGTYRQLFHPEQXINGKEDAANNYARGHYTIGKXIVDLVL 438
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G IVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 439 DRIRXLADQCTGLQGFLIFHSFG 507
IR A+ L+GF + HS G
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLG 140
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 199
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTXVD-XVRTGTYRQLFHPEQXINGKE--DAANNYARGHY 405
F Q D +VPRAV VDLEP ++ +++ + LF+ + A NN+A G Y
Sbjct: 53 FYQAD-DDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHS 501
G+ + + ++D I A+ L G L HS
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHS 142
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 95 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 187
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTXVD-XVRTGTYRQLFHPEQXINGKE--DAANNYARGHY 405
F Q D +VPRAV VDLEP ++ +++ + LF+ + A NN+A G Y
Sbjct: 53 FYQAD-DDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 406 TIGKXIVDLVLDRIRXLADQCTGLQGFLIFHS 501
G+ + + ++D I A+ L G L HS
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHS 142
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 95 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 187
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,715,881
Number of Sequences: 27780
Number of extensions: 262751
Number of successful extensions: 745
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -