SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0195
         (558 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7YT29 Cluster: Transcription factor BmEts; n=3; Obtect...   188   6e-47
UniRef50_UPI00015B5E32 Cluster: PREDICTED: similar to transcript...    47   3e-04
UniRef50_UPI00006A004A Cluster: ETS-related transcription factor...    42   0.013
UniRef50_UPI0000DB70DF Cluster: PREDICTED: similar to ets homolo...    38   0.12 
UniRef50_Q0KME1 Cluster: Phage integrase; n=3; Shewanella baltic...    38   0.12 
UniRef50_Q9RMG3 Cluster: Pesticidal crystal protein cry2Ad (Inse...    36   0.48 
UniRef50_UPI0000DB7713 Cluster: PREDICTED: similar to proprotein...    36   0.64 
UniRef50_Q15SE2 Cluster: Putative uncharacterized protein precur...    36   0.85 
UniRef50_UPI0000E4A8B3 Cluster: PREDICTED: similar to stromal in...    35   1.1  
UniRef50_Q09493 Cluster: Putative uncharacterized protein shn-1;...    35   1.1  
UniRef50_Q06546 Cluster: GA-binding protein alpha chain; n=30; E...    35   1.1  
UniRef50_Q4S459 Cluster: Chromosome 20 SCAF14744, whole genome s...    34   2.6  
UniRef50_Q7QTM0 Cluster: GLP_0_39988_41229; n=3; Giardia lamblia...    34   2.6  
UniRef50_Q59SS0 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_A6W5F2 Cluster: Proline-specific peptidase; n=2; Actino...    33   3.4  
UniRef50_Q5AXN6 Cluster: Predicted protein; n=1; Emericella nidu...    33   4.5  
UniRef50_UPI0000F21820 Cluster: PREDICTED: hypothetical protein;...    33   6.0  
UniRef50_Q7RJ68 Cluster: Putative uncharacterized protein PY0339...    33   6.0  
UniRef50_Q6BNP3 Cluster: Debaryomyces hansenii chromosome E of s...    33   6.0  
UniRef50_UPI0000DD7EFC Cluster: PREDICTED: similar to CG3104-PA,...    32   7.9  
UniRef50_A2R0X8 Cluster: Remark: the protein shows partial homol...    32   7.9  
UniRef50_Q6AXL5 Cluster: HSPB1-associated protein 1 homolog; n=2...    32   7.9  

>UniRef50_Q7YT29 Cluster: Transcription factor BmEts; n=3;
           Obtectomera|Rep: Transcription factor BmEts - Bombyx
           mori (Silk moth)
          Length = 389

 Score =  188 bits (459), Expect = 6e-47
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = +2

Query: 254 RDDWKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMA 433
           RDDWKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMA
Sbjct: 77  RDDWKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMA 136

Query: 434 HPSMDPVASRKIGDNIFDRLHTRLNK 511
           HPSMDPVASRKIGDNIFDRLHTRLN+
Sbjct: 137 HPSMDPVASRKIGDNIFDRLHTRLNE 162



 Score =  172 bits (419), Expect = 4e-42
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +3

Query: 27  MIDYARPFEQSTCDIYYTQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIE 206
           MIDYARPFEQSTCDIYYTQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIE
Sbjct: 1   MIDYARPFEQSTCDIYYTQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIE 60

Query: 207 NAANVYHTLVSCREYH 254
           NAANVYHTLVSCREYH
Sbjct: 61  NAANVYHTLVSCREYH 76



 Score = 37.1 bits (82), Expect = 0.28
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 511 DMFRQSSIFRYAESEP 558
           DMFRQSSIFRYAESEP
Sbjct: 163 DMFRQSSIFRYAESEP 178


>UniRef50_UPI00015B5E32 Cluster: PREDICTED: similar to transcription
           factor BmEts; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to transcription factor BmEts - Nasonia
           vitripennis
          Length = 329

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 28/96 (29%), Positives = 46/96 (47%)
 Frame = +2

Query: 215 QCLPHPRQLQRVPRDDWKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDL 394
           +CL        V    W  K + DW +++T++W++  A  +G   Y     N  + G +L
Sbjct: 53  KCLLGEETEAEVDGATWSSKPIEDWCQEETINWLMTAASCLG-QNYGSIQQNLALPGKEL 111

Query: 395 RNMKREDFVQRMAHPSMDPVASRKIGDNIFDRLHTR 502
            ++ R DFV R      DPV     GD +++ LHT+
Sbjct: 112 LSLSRHDFVAR------DPV----FGDRLYNLLHTQ 137


>UniRef50_UPI00006A004A Cluster: ETS-related transcription factor
           Elf-5 (E74-like factor 5) (Epithelium-specific Ets
           transcription factor 2) (ESE-2) (Epithelium- restricted
           ESE-1-related Ets factor).; n=1; Xenopus tropicalis|Rep:
           ETS-related transcription factor Elf-5 (E74-like factor
           5) (Epithelium-specific Ets transcription factor 2)
           (ESE-2) (Epithelium- restricted ESE-1-related Ets
           factor). - Xenopus tropicalis
          Length = 256

 Score = 41.5 bits (93), Expect = 0.013
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 263 WKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQ 424
           W   +   WT+D    W+     S  +    IPF ++ V+GL L NM R+DF +
Sbjct: 1   WTSLLPEHWTKDHVCEWLQYCCDSYKLDANCIPFSHFNVSGLQLCNMTRDDFTE 54


>UniRef50_UPI0000DB70DF Cluster: PREDICTED: similar to ets
           homologous factor; n=1; Apis mellifera|Rep: PREDICTED:
           similar to ets homologous factor - Apis mellifera
          Length = 293

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +2

Query: 263 WKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMAHPS 442
           W YK   +W +++T++W++  A +IG   Y +   +  V G +L    ++DF    AH  
Sbjct: 67  WLYKPTKNWCQEETINWLMTAASTIG-QPYSLIQHSLAVPGNELITFTKDDF---KAH-- 120

Query: 443 MDPVASRKIGDNIFDRL 493
            DP      GD ++D L
Sbjct: 121 -DPA----YGDKLYDLL 132


>UniRef50_Q0KME1 Cluster: Phage integrase; n=3; Shewanella
           baltica|Rep: Phage integrase - Shewanella baltica OS195
          Length = 431

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +2

Query: 275 VVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMAHPSMDPV 454
           + + W + DTV+W V+  ++  +++Y +P    RV  ++L +  +E  +++M H  M P 
Sbjct: 236 IALAWEDIDTVNWTVNIRRARVLTQYKVPKERGRVRVIELIDPAKEWLIEQMQHTMMLPT 295

Query: 455 ASRKI--GDNI 481
              ++   DNI
Sbjct: 296 IELEVKQRDNI 306


>UniRef50_Q9RMG3 Cluster: Pesticidal crystal protein cry2Ad
           (Insecticidal delta-endotoxin CryIIA(d)); n=32; Bacillus
           thuringiensis|Rep: Pesticidal crystal protein cry2Ad
           (Insecticidal delta-endotoxin CryIIA(d)) - Bacillus
           thuringiensis
          Length = 633

 Score = 36.3 bits (80), Expect = 0.48
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = +3

Query: 9   RTYDNKMIDYARPFEQSTCDIYYTQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAY 188
           RTY N + +Y R +     D Y T      TRL D   FR     +++  Y S  S   Y
Sbjct: 206 RTYQNHLRNYTRDYSNYCIDTYQTAFRGLNTRLHDMLEFRTYMFLNVF-EYVSIWSLFKY 264

Query: 189 EEPEIENAANVY 224
           +   + + AN+Y
Sbjct: 265 QSLLVSSGANLY 276


>UniRef50_UPI0000DB7713 Cluster: PREDICTED: similar to proprotein
           convertase subtilisin/kexin type 1 preproprotein isoform
           1; n=2; Apocrita|Rep: PREDICTED: similar to proprotein
           convertase subtilisin/kexin type 1 preproprotein isoform
           1 - Apis mellifera
          Length = 714

 Score = 35.9 bits (79), Expect = 0.64
 Identities = 23/89 (25%), Positives = 36/89 (40%)
 Frame = +2

Query: 257 DDWKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMAH 436
           + WK+  V  W ED   SW +D    +  S  + P       G    N   E F   + H
Sbjct: 597 EKWKFMSVASWGEDPRGSWTLDILDEVIHSRINFPNLISCAIGPKENNGTIEGFA-LVLH 655

Query: 437 PSMDPVASRKIGDNIFDRLHTRLNKICSD 523
            + +    RK G  I+++ + R+  I  D
Sbjct: 656 GTREMPEYRKNGPRIYNQDYNRIRNINDD 684


>UniRef50_Q15SE2 Cluster: Putative uncharacterized protein
           precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
           Putative uncharacterized protein precursor -
           Pseudoalteromonas atlantica (strain T6c / BAA-1087)
          Length = 254

 Score = 35.5 bits (78), Expect = 0.85
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
 Frame = +3

Query: 51  EQSTCDIYYTQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIEN--AANVY 224
           +QS CD+        PT+++  +  +R N+   +   Y     D+YE P   N  A +VY
Sbjct: 102 KQSFCDVQLHMEWRTPTQVEGMKGQQRNNSGVFFQQRYEVQVLDSYENPTYSNGQAGSVY 161

Query: 225 HTLVSCREYHEMIGSTKWWSIGPKMIQFRG*S-TQP 329
              +         G  +++ I     +F+G   TQP
Sbjct: 162 KQTIPLANAMRPAGEWQYYDIIYTAPRFKGKELTQP 197


>UniRef50_UPI0000E4A8B3 Cluster: PREDICTED: similar to stromal
           interaction molecule 1 precursor; n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           stromal interaction molecule 1 precursor -
           Strongylocentrotus purpuratus
          Length = 514

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 263 WKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTG 385
           WKY  V +WT D TV W+ D   S+ + +Y   F N  + G
Sbjct: 156 WKYSEVYNWTVDKTVKWLED---SVDLPQYAERFQNNGIEG 193


>UniRef50_Q09493 Cluster: Putative uncharacterized protein shn-1; n=3;
            Caenorhabditis|Rep: Putative uncharacterized protein
            shn-1 - Caenorhabditis elegans
          Length = 1110

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +2

Query: 263  WKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQ----RM 430
            +++K V  W+ DD + W+     S+ +SEY   F + R+ G  LR   R  F Q    R+
Sbjct: 1040 FEHKKVDVWSVDDVIGWL----SSLHLSEYTPAFRSQRINGRCLRQCDRSRFTQLGVTRI 1095

Query: 431  AH 436
            AH
Sbjct: 1096 AH 1097


>UniRef50_Q06546 Cluster: GA-binding protein alpha chain; n=30;
           Euteleostomi|Rep: GA-binding protein alpha chain - Homo
           sapiens (Human)
          Length = 454

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +2

Query: 281 VDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRM 430
           + W+ D  + W+V   +   +++ D+   N  ++G +L ++ +EDF QR+
Sbjct: 187 IQWSTDQVLHWVVWVMKEFSMTDIDLTTLN--ISGRELCSLNQEDFFQRV 234


>UniRef50_Q4S459 Cluster: Chromosome 20 SCAF14744, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 20
           SCAF14744, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 820

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +2

Query: 278 VVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTG 385
           V +WT +DTV W+ D   S+ + +Y+  F ++RVTG
Sbjct: 110 VHNWTMEDTVQWLKD---SVELPQYEKNFRDFRVTG 142


>UniRef50_Q7QTM0 Cluster: GLP_0_39988_41229; n=3; Giardia lamblia
           ATCC 50803|Rep: GLP_0_39988_41229 - Giardia lamblia ATCC
           50803
          Length = 413

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 491 VCRKCYLLSSSKRQGPC-LDGPSVGRSLHASCSVDPSQSLCS 369
           +C +C   S + + G C   G S  RSL + C+ D S+ LC+
Sbjct: 116 ICTECVNTSHAPKNGGCTFVGESASRSLFSDCTKDASRGLCT 157


>UniRef50_Q59SS0 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 415 VFTLHVP*IQASHSVVKERYIVFTDTYALGCVDYPR--NCIIFGPIDHHFVLPIISWYSL 242
           +F ++ P I A H  +   YI++   Y   C D PR  +  IF  + H F   ++ +  +
Sbjct: 48  LFVVYFPPIIAVHQCIITLYILYNVLYVSTCPDQPRIVSLFIFALLSHAFAFRVVDFIFI 107

Query: 241 Q 239
           Q
Sbjct: 108 Q 108


>UniRef50_A6W5F2 Cluster: Proline-specific peptidase; n=2;
           Actinomycetales|Rep: Proline-specific peptidase -
           Kineococcus radiotolerans SRS30216
          Length = 319

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = +3

Query: 84  TTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIENAANVYHTLVSCREYHEMI 263
           TT+ P  L   QVF    A H+      +P + A  E ++E    VYHT+    E+H ++
Sbjct: 182 TTTDPEYLAATQVFY---ARHVCRTTPVHPDFAA-TEAQLEADPTVYHTMNGPNEFH-VV 236

Query: 264 GSTKWWSI 287
           G+ + WSI
Sbjct: 237 GTLRDWSI 244


>UniRef50_Q5AXN6 Cluster: Predicted protein; n=1; Emericella
           nidulans|Rep: Predicted protein - Emericella nidulans
           (Aspergillus nidulans)
          Length = 449

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
 Frame = -2

Query: 497 CGVCRKCYLLSSSKRQG--------PCLDGPSVGRSLHASCSVDPS-QSLCS*RTVYRIH 345
           C +CR+ Y L  S   G        P +   SV + LH SC  +P+ + LC   TVY  H
Sbjct: 53  CLICRRLYPLVLSHLYGDLIVSCNPPEVQHESVSKLLHRSCRQNPALRGLCKRLTVY-YH 111

Query: 344 *YLCSGLCRLSTKLYHLRSN 285
            Y  S    L   LY++ ++
Sbjct: 112 DYAASYQEELGNPLYYIAND 131


>UniRef50_UPI0000F21820 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 166

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 284 DWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQ 424
           +WT+     W+  T     I    IPF N+ + G  L NM  +DF +
Sbjct: 54  NWTKFQVWEWLQQTLDMHQIDATSIPFQNFDLDGRQLCNMSFQDFTR 100


>UniRef50_Q7RJ68 Cluster: Putative uncharacterized protein PY03395;
           n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03395 - Plasmodium yoelii yoelii
          Length = 1574

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +3

Query: 129 RGNASHIYGNYYSNPSYDAYEEPEIENAANVYHTLVSCREYHEMIGSTKWWSIGPKMIQ 305
           +    H+Y NYY +  Y  YEE ++EN  N+ + L S + Y+    + K   IG K+ Q
Sbjct: 341 KSEKKHLYNNYYKSSFY--YEENKLEN-ENLNNILYSNKMYNNAEKNKKRKLIGNKINQ 396


>UniRef50_Q6BNP3 Cluster: Debaryomyces hansenii chromosome E of strain
            CBS767 of Debaryomyces hansenii; n=2;
            Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
            E of strain CBS767 of Debaryomyces hansenii -
            Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 1664

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = -1

Query: 507  FSLVWSLSKMLSPIFLEATGSMLGWAIRWTKSSRFMFRRSKPVTL*LKNGISYSLIPMLW 328
            + L   L++ L    + A+G++ GW+I  TK   F+F     + L       YS +   W
Sbjct: 1178 WKLTVKLNRQLEEPLVVASGTLPGWSINVTKRFPFIFPLDTRIFLLQSTSFGYSRLIHQW 1237

Query: 327  AVSTIHE 307
             + T  E
Sbjct: 1238 QIRTNQE 1244


>UniRef50_UPI0000DD7EFC Cluster: PREDICTED: similar to CG3104-PA,
           isoform A; n=6; Euarchontoglires|Rep: PREDICTED: similar
           to CG3104-PA, isoform A - Homo sapiens
          Length = 585

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 415 LRPTDGPSKHGPCRFEEDRR*HFR 486
           LRPTDGP ++ P +F+E R  HFR
Sbjct: 533 LRPTDGP-EYSPTQFQEQRLEHFR 555


>UniRef50_A2R0X8 Cluster: Remark: the protein shows partial homology
           to ice nucleation proteins. precursor; n=2;
           Aspergillus|Rep: Remark: the protein shows partial
           homology to ice nucleation proteins. precursor -
           Aspergillus niger
          Length = 326

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 78  TQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIENAAN 218
           T TT+ PT          GN  + YGNY S  +Y   EEPE+ + A+
Sbjct: 200 TTTTAVPTTTAPASYGDYGNYGN-YGNYGSYEAYKRDEEPEVSSTAS 245


>UniRef50_Q6AXL5 Cluster: HSPB1-associated protein 1 homolog; n=2;
           Danio rerio|Rep: HSPB1-associated protein 1 homolog -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 449

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 24/83 (28%), Positives = 36/83 (43%)
 Frame = +2

Query: 68  HLLHPDDLSAHPPRRLPSLQERKRFSHIRKLLLQSFIRRVRRA*D*KCCQCLPHPRQLQR 247
           HL  PDD +   P R+P  +E   FSH+   +++  +++       +       P Q+  
Sbjct: 172 HLFPPDDTACLYPTRVP-YEESSVFSHVN--VIRPDLKKFPAYGRARLYTVTLQPGQVLF 228

Query: 248 VPRDDWKYKVVVDWTEDDTVSWI 316
           VPR  W Y   VD       SWI
Sbjct: 229 VPRHWWHYVESVDPVTVSVNSWI 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,355,842
Number of Sequences: 1657284
Number of extensions: 11346174
Number of successful extensions: 33447
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 32323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33413
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -