Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0195
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   1.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   7.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.5  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = -3

Query: 388 QASHSVVKERYIVFTDTYALGCVDYPRNCIIFGPIDHHFVLPIISWYSLQLTRV 227
           Q   S + +RY VF D + L     PR+ I   P+       + +W S   T +
Sbjct: 171 QYLRSTLSDRYKVFVDLFNLSTFLIPRSYI--PPLSTSMRSHLCNWGSANSTNI 222


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = -3

Query: 388 QASHSVVKERYIVFTDTYALGCVDYPRNCIIFGPIDHHFVLPIISWYSLQLTRV 227
           Q   S + +RY VF D + L     PR+ I   P+       + +W S   T +
Sbjct: 331 QYLRSTLSDRYKVFVDLFNLSTFLIPRSYI--PPLSTSMRSHLCNWGSANSTNI 382


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = -3

Query: 388 QASHSVVKERYIVFTDTYALGCVDYPRNCIIFGPIDHHFVLPIISWYSLQLTRV 227
           Q   S + +RY VF D + L     PR+ I   P+       + +W S   T +
Sbjct: 331 QYLRSTLSDRYKVFVDLFNLSTFLIPRSYI--PPLSTSMRSHLCNWGSANSTNI 382


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 379 DWLGSTEHEA*RLRPTDGPSKH 444
           DWL S       L P+ GP  H
Sbjct: 105 DWLSSPSGNVPPLTPSPGPPSH 126


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 42  RPFEQSTCDIYYTQTTSAPTRL 107
           +PF    CD  ++Q++S  T +
Sbjct: 48  KPFRCPVCDRRFSQSSSVTTHM 69


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 42  RPFEQSTCDIYYTQTTSAPTRL 107
           +PF    CD  ++Q++S  T +
Sbjct: 304 KPFRCPVCDRRFSQSSSVTTHM 325


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 12  TYDNKMIDYARPFEQSTCDI 71
           T DNK++     +  +TCDI
Sbjct: 300 TIDNKLLFGVLAYYSTTCDI 319


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -3

Query: 319 DYPRNCIIFGPIDHHFVLPIISW 251
           +Y    I    +  HF+LP+ +W
Sbjct: 119 EYIYGIIFLSILIPHFLLPVAAW 141


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -3

Query: 319 DYPRNCIIFGPIDHHFVLPIISW 251
           +Y    I    +  HF+LP+ +W
Sbjct: 119 EYIYGIIFLSILIPHFLLPVAAW 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,112
Number of Sequences: 336
Number of extensions: 2883
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)