Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0194
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 33 0.20
03_01_0431 + 3324118-3324405,3324513-3324572,3325352-3326143 29 2.5
03_01_0048 - 409557-409825,409921-411004 29 2.5
12_02_0061 - 13063434-13063525,13063679-13064566,13064912-130649... 27 7.5
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 27 7.5
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 27 7.5
03_06_0205 - 32347636-32347646,32347762-32347801,32347959-323480... 27 7.5
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 27 7.5
10_08_0831 + 20898186-20899178,20899307-20899496,20899853-20900127 27 10.0
07_01_0319 + 2245724-2245753,2246797-2246976,2247547-2247630 27 10.0
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 27 10.0
02_05_0246 + 27136590-27138610,27138933-27139056,27139401-271396... 27 10.0
01_05_0389 + 21716056-21716191,21716275-21716597,21716889-217175... 27 10.0
>09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 32.7 bits (71), Expect = 0.20
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 156 VYEDVRGTTKDGCKEMSLFVKQIIHNAERISIYRS--KISLQEKHWLIESSVRFSKISKS 329
V E +RG K + ++ ++ HN R S+ + KI +E + L + ++R+ +IS++
Sbjct: 974 VVESMRGFEKLVTDQQTIIAHKVQHNESRFSLLKEQCKILAKEGNTLRKKALRYKEISET 1033
Query: 330 KLEYLKTRDLK 362
+ L+ +L+
Sbjct: 1034 RASNLQKAELE 1044
>03_01_0431 + 3324118-3324405,3324513-3324572,3325352-3326143
Length = 379
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -1
Query: 266 YLRPINTYTFCIVYNLLNKQTHFFAAVF 183
++R +NTY F + N LNK++HF++ F
Sbjct: 89 FVRQLNTY-FLVRTNYLNKRSHFYSLRF 115
>03_01_0048 - 409557-409825,409921-411004
Length = 450
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 423 PFLQTFSKMITSFVHSCFVTVLNLSFSGIPASIW 322
P L T S + F F+TV + +G+P +IW
Sbjct: 294 PCLDTVSYSLLVFFSGMFITVSGFNKTGLPGAIW 327
>12_02_0061 -
13063434-13063525,13063679-13064566,13064912-13064960,
13065059-13065330,13065422-13065797
Length = 558
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 230 QCRTYKYLSV-EDIFAREALAYRELCPVFEDLQIEAGIPENERFKTVTKQECTKDVIILE 406
Q R +Y++ E I+ + + PV LQ++ +P N ++ T + +DV+
Sbjct: 385 QYRNARYVTPPEAIYRMLGIPLFGIYPVV--LQLQLHLP-NMQYVTYIEDSNLEDVVNRP 441
Query: 407 NVCKKGYKTYYRMDVVSPKFAELAIKE 487
+ + Y++M+ V PK +L KE
Sbjct: 442 SSTRTTLTEYFKMNQVDPKERKLLYKE 468
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 428 KTYYRMDVVSPKFAELAIKELARFHGLHWFWKSSVRNISMK 550
K Y DVV ++ + ++A+ HG W W V + +++
Sbjct: 274 KGYDGKDVVVQNLRQVCVYKVAKEHGKPWLWWDYVTDFAIR 314
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 428 KTYYRMDVVSPKFAELAIKELARFHGLHWFWKSSVRNISMK 550
K Y DVV ++ + ++A+ HG W W V + +++
Sbjct: 274 KGYDGKDVVVQNLRQVCVYKVAKEHGKPWLWWDYVTDFAIR 314
>03_06_0205 -
32347636-32347646,32347762-32347801,32347959-32348060,
32348473-32348599,32348893-32350835,32351347-32351367
Length = 747
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 251 LSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFKTVTKQ 376
LS ED R+ +E +EDLQIEAG+ + ++T+T++
Sbjct: 450 LSSEDDLLRQIAKIKE---EYEDLQIEAGVRDGV-YQTITRK 487
>03_02_0199 -
6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 170 QRNNKRRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-ALAYRELC 304
+ +N L ++ AN C T KY +ED F E A E+C
Sbjct: 788 ENHNSSILHKDNLCASANTVSCNTEKYKLIEDFFNLEIASDASEIC 833
>10_08_0831 + 20898186-20899178,20899307-20899496,20899853-20900127
Length = 485
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 423 PFLQTFSKMITSFVHSCFVTVLNLSFSGIPASIW 322
P L S + F FVTV + +G+P +IW
Sbjct: 327 PCLDKVSYSLLVFFSGMFVTVSGFNKTGLPGAIW 360
>07_01_0319 + 2245724-2245753,2246797-2246976,2247547-2247630
Length = 97
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 373 FCYRFKSLVFRYSSFDLEIFEN-RTELSISQCFSCKDI 263
F Y S+V YS ++EIF++ + L +S F K +
Sbjct: 3 FLYHENSIVIEYSDVNMEIFQSIQKHLQVSMEFVMKSV 40
>06_01_0691 -
5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 233 CRTYKYLSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFKTVTKQEC 382
C Y+YL + EA + E C VF D+Q +P + ++++ C
Sbjct: 676 CDLYEYLIT---YLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCC 722
>02_05_0246 +
27136590-27138610,27138933-27139056,27139401-27139694,
27139776-27139978,27140307-27140589
Length = 974
Score = 27.1 bits (57), Expect = 10.0
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +2
Query: 317 DLQIEAGIPENERFKTVTKQECTKDVI---ILENVCKKGYKTYYRMDVVSPKFAELAIKE 487
D QI+ E + T + E + I NV K G K Y D++ E AIK
Sbjct: 634 DEQIQQATGEGDESATQIRSEYEAKIAAKKIFHNVAKPGSKYIYLSDLLRFMRQEEAIKT 693
Query: 488 LARFHGLHWFWKSSVRNI 541
+ F G + S R++
Sbjct: 694 MDLFEGAQEHSRVSKRSL 711
>01_05_0389 +
21716056-21716191,21716275-21716597,21716889-21717518,
21717602-21718054
Length = 513
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 458 PKFAELAIKELARFHGLHWFWKSSV 532
P+ + I+E+ R G HW+W+ V
Sbjct: 475 PETKGIPIEEMDRIWGKHWYWRRFV 499
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,411,759
Number of Sequences: 37544
Number of extensions: 251215
Number of successful extensions: 783
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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