Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0194
         (551 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)     31   0.83 
SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09)        31   0.83 
SB_48088| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_50141| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.4  
SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)                 28   4.4  
SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4)            28   5.8  
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)        28   5.8  
SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.8  
SB_59710| Best HMM Match : Peptidase_S24 (HMM E-Value=0.7)             27   7.7  
SB_59044| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)         27   7.7  
SB_42975| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_1737| Best HMM Match : UPF0147 (HMM E-Value=6)                      27   7.7  

>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
          Length = 2022

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 210  FVKQIIHNAERISIYRS-KISLQE-KHWLIESSVRFSKISKSKLEYLKTRDLK 362
            F +QI   A+   + RS K  L E ++W +E  V F  I  SKL  L T  LK
Sbjct: 1879 FDEQIKRQADHDKVLRSIKEKLNECRNWQMEHKVSFEMIRSSKLSILVTEILK 1931


>SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09)
          Length = 1423

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 210 FVKQIIHNAERISIYRS-KISLQE-KHWLIESSVRFSKISKSKLEYLKTRDLK 362
           F +QI   A+   + RS K  L E ++W +E  V F  I  SKL  L T  LK
Sbjct: 267 FDEQIKRQADHDKVLRSIKEKLNECRNWQMEHKVSFEMIRSSKLSILVTEILK 319


>SB_48088| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 138

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 369 VTVLNLSFSGIPASIWRSSKTGQ 301
           +TV+NL F  +P  +W+   TG+
Sbjct: 36  ITVINLQFPALPTELWKDGCTGK 58


>SB_50141| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 328

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 445 GRSVSEIC-GIGYQRIGEIPWSPLV 516
           G+S+S +  G+G +R GEIPW   V
Sbjct: 159 GKSLSSVARGVGCRRSGEIPWRKCV 183


>SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
          Length = 313

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 445 GRSVSEIC-GIGYQRIGEIPWSPLV 516
           G+S+S +  G+G +R GEIPW   V
Sbjct: 207 GKSLSSVARGVGRRRSGEIPWRKCV 231


>SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4)
          Length = 170

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 204 SLFVKQIIHNAERISIYRSK-------ISLQEKHWLIESSVRFSKISKSKLEYLKTRDLK 362
           S F+KQ+ +  E+  IY  K       ++ + K WL + + +       +   L TRD++
Sbjct: 41  STFLKQVKNMTEKDEIYTGKDLEELDKVNNETKEWLEKMTKKQDDTEPHEAPVLLTRDIE 100

Query: 363 R*QNK 377
             QNK
Sbjct: 101 HKQNK 105


>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
          Length = 991

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -1

Query: 317 LRKPDRALYKPMLLLQRYLRPINTYTFCIVYNLLNKQTHFFAAVFCCSSDIFVYISL-FV 141
           LR+  ++ + P    Q  L+P +    C V N       FFA   C  S I V  SL FV
Sbjct: 21  LRRLRKSKFAPTASTQYVLKPTSPIALCDVKNRFQFYNVFFA---CIRSSIGVMRSLVFV 77

Query: 140 SVLHI 126
           + L+I
Sbjct: 78  TCLYI 82


>SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 427

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +1

Query: 445 GRSVSEIC-GIGYQRIGEIPW 504
           G+S+S +  G+G +R GEIPW
Sbjct: 279 GKSLSSVARGVGRRRSGEIPW 299


>SB_59710| Best HMM Match : Peptidase_S24 (HMM E-Value=0.7)
          Length = 230

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 383 TKDVIILENVCKKGYKTYYRMDVVS 457
           T+D+++L   C K +K   R DVVS
Sbjct: 62  TRDIVVLNKWCVKNFKGIKRGDVVS 86


>SB_59044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 96

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 193 QPSFVVPLTSSYTSVCLYQYY 131
           QP F+VP+T+S T   + QY+
Sbjct: 42  QPVFLVPITASITGASIRQYF 62


>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
          Length = 1491

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 251  LSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFKTVTKQECTK 388
            L ++D  A E  AYRE    FE+ Q+E      E+   V K+E TK
Sbjct: 967  LKLQDTVAEEVQAYREEIKDFEN-QLEIEKQRAEQELGVLKEELTK 1011


>SB_42975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 594

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 422 GYKTYYRM-DVVSPKFAELAIKELARFHGLHWFWKSSVRN 538
           GY  Y  + DVV PK   +A + L     L W++K+ V N
Sbjct: 53  GYDVYQVLTDVVKPKIIVVAYESLKIKENLSWWFKTVVVN 92


>SB_1737| Best HMM Match : UPF0147 (HMM E-Value=6)
          Length = 253

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 383 TKDVIILENVCKKGYKTYYRMDVVS 457
           T+D+++L   C K +K   R DVVS
Sbjct: 107 TRDIVVLNKWCVKNFKGIKRGDVVS 131


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,626,344
Number of Sequences: 59808
Number of extensions: 334142
Number of successful extensions: 832
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)