Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0194
(551 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of... 31 2.7
S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein. 31 2.7
D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein. 31 2.7
BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural mainten... 31 2.7
AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance ... 31 2.7
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 31 3.6
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 31 3.6
BC000605-1|AAH00605.1| 328|Homo sapiens glyoxylate reductase/hy... 30 6.2
AL158155-3|CAI13848.1| 328|Homo sapiens glyoxylate reductase/hy... 30 6.2
AL158155-2|CAI13847.1| 395|Homo sapiens glyoxylate reductase/hy... 30 6.2
AF146689-1|AAD46517.1| 328|Homo sapiens hydroxypyruvate reducta... 30 6.2
AF146018-1|AAD45886.1| 328|Homo sapiens hydroxypyruvate reducta... 30 6.2
AF134895-1|AAF00111.1| 328|Homo sapiens glyoxylate reductase pr... 30 6.2
>Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 257 VEDIFAREALA---YRELCPVFEDLQIEAGIPENERFKTVTKQECTKDVIILENVCKKGY 427
+ I+AREAL Y +LC +D Q E I + +Q+ + +L+ +
Sbjct: 969 ISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQE---MNTLQQKLNEQQSVLQRIAAPNM 1025
Query: 428 KTYYRMDVVSPKFAE 472
K +++ V KF E
Sbjct: 1026 KAMEKLESVRDKFQE 1040
>S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein.
Length = 1233
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 257 VEDIFAREALA---YRELCPVFEDLQIEAGIPENERFKTVTKQECTKDVIILENVCKKGY 427
+ I+AREAL Y +LC +D Q E I + +Q+ + +L+ +
Sbjct: 969 ISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQE---MNTLQQKLNEQQSVLQRIAAPNM 1025
Query: 428 KTYYRMDVVSPKFAE 472
K +++ V KF E
Sbjct: 1026 KAMEKLESVRDKFQE 1040
>D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein.
Length = 1233
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 257 VEDIFAREALA---YRELCPVFEDLQIEAGIPENERFKTVTKQECTKDVIILENVCKKGY 427
+ I+AREAL Y +LC +D Q E I + +Q+ + +L+ +
Sbjct: 969 ISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQE---MNTLQQKLNEQQSVLQRIAAPNM 1025
Query: 428 KTYYRMDVVSPKFAE 472
K +++ V KF E
Sbjct: 1026 KAMEKLESVRDKFQE 1040
>BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural maintenance
of chromosomes 1-like 1 protein.
Length = 1233
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 257 VEDIFAREALA---YRELCPVFEDLQIEAGIPENERFKTVTKQECTKDVIILENVCKKGY 427
+ I+AREAL Y +LC +D Q E I + +Q+ + +L+ +
Sbjct: 969 ISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQE---MNTLQQKLNEQQSVLQRIAAPNM 1025
Query: 428 KTYYRMDVVSPKFAE 472
K +++ V KF E
Sbjct: 1026 KAMEKLESVRDKFQE 1040
>AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 257 VEDIFAREALA---YRELCPVFEDLQIEAGIPENERFKTVTKQECTKDVIILENVCKKGY 427
+ I+AREAL Y +LC +D Q E I + +Q+ + +L+ +
Sbjct: 969 ISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQE---MNTLQQKLNEQQSVLQRIAAPNM 1025
Query: 428 KTYYRMDVVSPKFAE 472
K +++ V KF E
Sbjct: 1026 KAMEKLESVRDKFQE 1040
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +2
Query: 170 QRNNKRRLQRNEFVC*ANYTQCRTYKYLSVED---IFAREALAYRELCPVFEDLQIEAGI 340
+R R+QR +C + Y YL VED + + L L P + +E GI
Sbjct: 989 RRTLMERVQRMMGLCCGYQSTFSQYSYLYVEDRKEVLGQFLLYGHILTPEEIEDHVEDGI 1048
Query: 341 PENERFKTVTKQECTKDVIILENVCK 418
PEN + K + + E VC+
Sbjct: 1049 PENPPLLSQFKVQIDSYETLYEEVCR 1074
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +2
Query: 170 QRNNKRRLQRNEFVC*ANYTQCRTYKYLSVED---IFAREALAYRELCPVFEDLQIEAGI 340
+R R+QR +C + Y YL VED + + L L P + +E GI
Sbjct: 989 RRTLMERVQRMMGLCCGYQSTFSQYSYLYVEDRKEVLGQFLLYGHILTPEEIEDHVEDGI 1048
Query: 341 PENERFKTVTKQECTKDVIILENVCK 418
PEN + K + + E VC+
Sbjct: 1049 PENPPLLSQFKVQIDSYETLYEEVCR 1074
>BC000605-1|AAH00605.1| 328|Homo sapiens glyoxylate
reductase/hydroxypyruvate reductase protein.
Length = 328
Score = 29.9 bits (64), Expect = 6.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +2
Query: 185 RRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-----ALAYRELCPVFEDLQIEAGIPEN 349
RR+ V A C ++ S E I A+E A A+ LC + + +
Sbjct: 13 RRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAG 72
Query: 350 ERFKTVTKQECTKDVIILENVCKKGYKTYYRMDVVSPKFAELAIKEL 490
K ++ D + L+ + K+G + Y DV++ AELA+ L
Sbjct: 73 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLL 119
>AL158155-3|CAI13848.1| 328|Homo sapiens glyoxylate
reductase/hydroxypyruvate reductase protein.
Length = 328
Score = 29.9 bits (64), Expect = 6.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +2
Query: 185 RRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-----ALAYRELCPVFEDLQIEAGIPEN 349
RR+ V A C ++ S E I A+E A A+ LC + + +
Sbjct: 13 RRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAG 72
Query: 350 ERFKTVTKQECTKDVIILENVCKKGYKTYYRMDVVSPKFAELAIKEL 490
K ++ D + L+ + K+G + Y DV++ AELA+ L
Sbjct: 73 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLL 119
>AL158155-2|CAI13847.1| 395|Homo sapiens glyoxylate
reductase/hydroxypyruvate reductase protein.
Length = 395
Score = 29.9 bits (64), Expect = 6.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +2
Query: 185 RRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-----ALAYRELCPVFEDLQIEAGIPEN 349
RR+ V A C ++ S E I A+E A A+ LC + + +
Sbjct: 13 RRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAG 72
Query: 350 ERFKTVTKQECTKDVIILENVCKKGYKTYYRMDVVSPKFAELAIKEL 490
K ++ D + L+ + K+G + Y DV++ AELA+ L
Sbjct: 73 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLL 119
>AF146689-1|AAD46517.1| 328|Homo sapiens hydroxypyruvate reductase
protein.
Length = 328
Score = 29.9 bits (64), Expect = 6.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +2
Query: 185 RRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-----ALAYRELCPVFEDLQIEAGIPEN 349
RR+ V A C ++ S E I A+E A A+ LC + + +
Sbjct: 13 RRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAG 72
Query: 350 ERFKTVTKQECTKDVIILENVCKKGYKTYYRMDVVSPKFAELAIKEL 490
K ++ D + L+ + K+G + Y DV++ AELA+ L
Sbjct: 73 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLL 119
>AF146018-1|AAD45886.1| 328|Homo sapiens hydroxypyruvate reductase
protein.
Length = 328
Score = 29.9 bits (64), Expect = 6.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +2
Query: 185 RRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-----ALAYRELCPVFEDLQIEAGIPEN 349
RR+ V A C ++ S E I A+E A A+ LC + + +
Sbjct: 13 RRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAG 72
Query: 350 ERFKTVTKQECTKDVIILENVCKKGYKTYYRMDVVSPKFAELAIKEL 490
K ++ D + L+ + K+G + Y DV++ AELA+ L
Sbjct: 73 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLL 119
>AF134895-1|AAF00111.1| 328|Homo sapiens glyoxylate reductase
protein.
Length = 328
Score = 29.9 bits (64), Expect = 6.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +2
Query: 185 RRLQRNEFVC*ANYTQCRTYKYLSVEDIFARE-----ALAYRELCPVFEDLQIEAGIPEN 349
RR+ V A C ++ S E I A+E A A+ LC + + +
Sbjct: 13 RRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAG 72
Query: 350 ERFKTVTKQECTKDVIILENVCKKGYKTYYRMDVVSPKFAELAIKEL 490
K ++ D + L+ + K+G + Y DV++ AELA+ L
Sbjct: 73 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLL 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,617,333
Number of Sequences: 237096
Number of extensions: 1441052
Number of successful extensions: 3507
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3505
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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