Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0193
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical pr...    30   0.98 
U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical pr...    30   0.98 
U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical pr...    30   0.98 
U41274-5|AAA82461.2|  571|Caenorhabditis elegans Nematode astaci...    29   1.3  
AJ561208-1|CAD99210.1|  278|Caenorhabditis elegans NAS-15 protei...    29   1.3  
AF022982-8|AAB69934.1|  234|Caenorhabditis elegans Hypothetical ...    29   1.3  
AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical ...    28   3.0  
AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical...    28   3.9  
AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical...    28   3.9  
AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical ...    28   3.9  
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr...    27   5.2  
U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical p...    27   5.2  
Z70682-7|CAA94585.2|  531|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AF031837-1|AAC13673.1|  624|Caenorhabditis elegans GLY5c protein.      27   6.9  
AF031836-1|AAC13672.1|  626|Caenorhabditis elegans GLY5b protein.      27   6.9  
AF031835-1|AAC13671.1|  623|Caenorhabditis elegans GLY5a protein.      27   6.9  
Z83731-4|CAB06021.2|  471|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AM498742-1|CAM58448.1|  471|Caenorhabditis elegans MAP kinase pr...    27   9.1  

>U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical
           protein F25B5.6c protein.
          Length = 484

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +1

Query: 157 CLXEHESSRDTSKTNTNRNGSKDYGLFQINDRYGAAKVPVQAKTATLSAPTSXTDDITKA 336
           C  +  SS D S  + N N S+D       ++   A   VQA   +L  P S T+D  K 
Sbjct: 390 CPTQLHSSIDKSADSANLNASRD-------EQAEKANQCVQAWKESLDQPESVTEDQMKV 442

Query: 337 AXCAKKIYK 363
             C    YK
Sbjct: 443 FDCISSAYK 451


>U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical
           protein F25B5.6a protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +1

Query: 157 CLXEHESSRDTSKTNTNRNGSKDYGLFQINDRYGAAKVPVQAKTATLSAPTSXTDDITKA 336
           C  +  SS D S  + N N S+D       ++   A   VQA   +L  P S T+D  K 
Sbjct: 416 CPTQLHSSIDKSADSANLNASRD-------EQAEKANQCVQAWKESLDQPESVTEDQMKV 468

Query: 337 AXCAKKIYK 363
             C    YK
Sbjct: 469 FDCISSAYK 477


>U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical
           protein F25B5.6b protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +1

Query: 157 CLXEHESSRDTSKTNTNRNGSKDYGLFQINDRYGAAKVPVQAKTATLSAPTSXTDDITKA 336
           C  +  SS D S  + N N S+D       ++   A   VQA   +L  P S T+D  K 
Sbjct: 427 CPTQLHSSIDKSADSANLNASRD-------EQAEKANQCVQAWKESLDQPESVTEDQMKV 479

Query: 337 AXCAKKIYK 363
             C    YK
Sbjct: 480 FDCISSAYK 488


>U41274-5|AAA82461.2|  571|Caenorhabditis elegans Nematode astacin
           protease protein15 protein.
          Length = 571

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +1

Query: 208 RNGSKDYGLFQINDRYGAAKVPVQAKTATLSAPTSXTDDIT 330
           RNG      F+IN  YG    PV+ +  T SAPTS    IT
Sbjct: 289 RNGFSKVDKFKINTLYGC---PVEGEKPTTSAPTSGPIVIT 326


>AJ561208-1|CAD99210.1|  278|Caenorhabditis elegans NAS-15 protein
           protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +1

Query: 208 RNGSKDYGLFQINDRYGAAKVPVQAKTATLSAPTSXTDDIT 330
           RNG      F+IN  YG    PV+ +  T SAPTS    IT
Sbjct: 183 RNGFSKVDKFKINTLYGC---PVEGEKPTTSAPTSGPIVIT 220


>AF022982-8|AAB69934.1|  234|Caenorhabditis elegans Hypothetical
           protein T23B12.1 protein.
          Length = 234

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 321 VSXGGRST*RCSLCLD-WHLCCTIPVVDLEQS 229
           VS  G     C  C D +H+ C+IP V +E++
Sbjct: 156 VSLAGNQVLACRRCRDCYHMACSIPTVSIEEA 187


>AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical
           protein Y113G7A.1 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 1   GNSKDTIEMQKLIIFALVV 57
           G SK TI+MQ L+IFAL++
Sbjct: 222 GMSKKTIQMQHLLIFALIL 240


>AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12c protein.
          Length = 624

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 124 GFEENLMRNWXCLXEHESSRDTSKTNTNRNGSKDYGLFQINDRY 255
           GF+  L  NW  + E +    T   +  R+ +   GLF I+ +Y
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKY 362


>AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12b protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 124 GFEENLMRNWXCLXEHESSRDTSKTNTNRNGSKDYGLFQINDRY 255
           GF+  L  NW  + E +    T   +  R+ +   GLF I+ +Y
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKY 362


>AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12a protein.
          Length = 626

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 124 GFEENLMRNWXCLXEHESSRDTSKTNTNRNGSKDYGLFQINDRY 255
           GF+  L  NW  + E +    T   +  R+ +   GLF I+ +Y
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKY 362


>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical protein
            F56D5.9 protein.
          Length = 1132

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
 Frame = +1

Query: 208  RNGSKDYGLFQINDRYG----AAKVPVQAKTATLSAPTSXTDDITKAAXC-------AKK 354
            RNG+ D G F + ++      A  V    K  TL++PTS ++ +TK+           +K
Sbjct: 844  RNGA-DRGAFNVENKTPEQVLAESVQTTTKFLTLTSPTSGSEGVTKSKLTEMGNLTDIEK 902

Query: 355  IYKRHR 372
            I+++HR
Sbjct: 903  IFEKHR 908


>U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical
           protein T22F3.10 protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 25  MQKLIIFALVVLCVGSEAKTFTRCGLVH 108
           M  L  F L + C+G  +  F +CG++H
Sbjct: 309 MLSLSFFILTMCCIGVNSGGFYKCGVLH 336


>Z70682-7|CAA94585.2|  531|Caenorhabditis elegans Hypothetical
           protein F08G5.5 protein.
          Length = 531

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 216 LEGLRIVPDQRPVWCSKGASPGKDCNVK 299
           +E L    D R +W  KG   G  C+VK
Sbjct: 347 IEALNYFKDYRVIWSHKGNVTGAKCHVK 374


>AF031837-1|AAC13673.1|  624|Caenorhabditis elegans GLY5c protein.
          Length = 624

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 124 GFEENLMRNWXCLXEHESSRDTSKTNTNRNGSKDYGLFQINDRY 255
           GF+  L  NW  + E +    T   +  R+ +   GLF I+  Y
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEY 362


>AF031836-1|AAC13672.1|  626|Caenorhabditis elegans GLY5b protein.
          Length = 626

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 124 GFEENLMRNWXCLXEHESSRDTSKTNTNRNGSKDYGLFQINDRY 255
           GF+  L  NW  + E +    T   +  R+ +   GLF I+  Y
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEY 362


>AF031835-1|AAC13671.1|  623|Caenorhabditis elegans GLY5a protein.
          Length = 623

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 124 GFEENLMRNWXCLXEHESSRDTSKTNTNRNGSKDYGLFQINDRY 255
           GF+  L  NW  + E +    T   +  R+ +   GLF I+  Y
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEY 362


>Z83731-4|CAB06021.2|  471|Caenorhabditis elegans Hypothetical
           protein M04C9.5 protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +1

Query: 205 NRNGSKDYGLFQINDRYGAAKV--PVQAKTATLSAPTSXTDDITKAAXCAKKIY 360
           N N S  Y  FQ+ ++ GA  V  P        SA +  +D     A  AKK Y
Sbjct: 281 NANQSLRYKYFQVAEKLGAPVVSQPAPGSIRKTSAASVKSDTKAMTAKAAKKDY 334


>AM498742-1|CAM58448.1|  471|Caenorhabditis elegans MAP kinase
           protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +1

Query: 205 NRNGSKDYGLFQINDRYGAAKV--PVQAKTATLSAPTSXTDDITKAAXCAKKIY 360
           N N S  Y  FQ+ ++ GA  V  P        SA +  +D     A  AKK Y
Sbjct: 281 NANQSLRYKYFQVAEKLGAPVVSQPAPGSIRKTSAASVKSDTKAMTAKAAKKDY 334


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,387,587
Number of Sequences: 27780
Number of extensions: 141482
Number of successful extensions: 368
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)