BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0190
(837 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 27 0.53
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 8.7
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 27.5 bits (58), Expect = 0.53
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 219 VLS*CPTHLELSGXRSEAPVAVPPLAINCRPHSDRLFANESRPV 88
VL CP +L+G R +APV +PP + DR+ E P+
Sbjct: 81 VLVCCPLVRKLTG-RFDAPVELPPPGECGKMQMDRIVGGEVAPI 123
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -2
Query: 161 WRYRHWRSTAGHIPTDSLLTRVDPFCPKR*EELVFHLT 48
W+ R W +T T L+ + P+ +R + FH++
Sbjct: 859 WQ-REWSTTTSGSWTRRLIPNIQPWITRRHGNIEFHMS 895
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,525
Number of Sequences: 2352
Number of extensions: 14733
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -