Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0190
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 128 5e-30
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 30 1.8
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 30 1.8
Z69884-10|CAA93753.1| 400|Caenorhabditis elegans Hypothetical p... 29 4.1
Z69883-7|CAA93745.1| 400|Caenorhabditis elegans Hypothetical pr... 29 4.1
U70852-5|AAK29817.2| 322|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z69635-4|CAB54216.1| 336|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z69635-3|CAA93460.1| 342|Caenorhabditis elegans Hypothetical pr... 28 7.2
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 128 bits (309), Expect = 5e-30
Identities = 79/184 (42%), Positives = 102/184 (55%)
Frame = +2
Query: 44 MASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERXPDSSRCVGHHESTG 223
M LA++SVSDKTGL+ LA L GL LIASGGTA ++ D +
Sbjct: 1 MTDGKSLAIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPE 60
Query: 224 DARGSGENFTSAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKXDVTVAD 403
G + AVH GILAR ++SD++D+++ +SVVVCNLYPF +TV D +V +
Sbjct: 61 MLGGRVKTLHPAVHGGILARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSVEE 120
Query: 404 AVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*QRNQREQTSSDVFRAQGRDLALKAF 583
AVENIDIGGVTLLRA + S + P E S R + + LALKAF
Sbjct: 121 AVENIDIGGVTLLRAAAKNHE-RVSVICDPADY--DHIISELKSGGTTRERRQLLALKAF 177
Query: 584 THTS 595
HT+
Sbjct: 178 EHTT 181
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 257 AVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKXDVTVADA 406
AV I +SD++ D+ R+K E S++ N+ Q +++ DVT A
Sbjct: 990 AVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNRFDVTAPGA 1039
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 257 AVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKXDVTVADA 406
AV I +SD++ D+ R+K E S++ N+ Q +++ DVT A
Sbjct: 990 AVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNRFDVTAPGA 1039
>Z69884-10|CAA93753.1| 400|Caenorhabditis elegans Hypothetical
protein C27C12.3 protein.
Length = 400
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 365 VQTVSKXDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*QRNQREQTSSDV 544
V V++ + +D N + V LL P T S+ P ++ ++ +RE +D
Sbjct: 220 VLEVARETMNSSDISPNKNTSSV-LLDGSPSTIWPPSDSLELPRSIQMRKCERESVKADT 278
Query: 545 FRAQGRDLALKAFTHTSGL*LAH--IRTTSGKQ 637
F G+ ++F + G+ + I TT G Q
Sbjct: 279 FSMSGQSFDDRSFAKSKGMIAQNLAISTTVGSQ 311
>Z69883-7|CAA93745.1| 400|Caenorhabditis elegans Hypothetical
protein C27C12.3 protein.
Length = 400
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 365 VQTVSKXDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTRPTTML*QRNQREQTSSDV 544
V V++ + +D N + V LL P T S+ P ++ ++ +RE +D
Sbjct: 220 VLEVARETMNSSDISPNKNTSSV-LLDGSPSTIWPPSDSLELPRSIQMRKCERESVKADT 278
Query: 545 FRAQGRDLALKAFTHTSGL*LAH--IRTTSGKQ 637
F G+ ++F + G+ + I TT G Q
Sbjct: 279 FSMSGQSFDDRSFAKSKGMIAQNLAISTTVGSQ 311
>U70852-5|AAK29817.2| 322|Caenorhabditis elegans Hypothetical
protein F45E4.6 protein.
Length = 322
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 326 EMISVVVCNLYPFVQTVSKXDVTVADAVENIDIGGVTLLRAXPRTTTGSPSSVTR 490
+ I + +LYPFV + T ADAV++ + + + RTTT + + T+
Sbjct: 244 DRIDFTLYDLYPFVGKLGGCIYTEADAVDDKNSIHTLFIYSTTRTTTTTAKTTTK 298
>Z69635-4|CAB54216.1| 336|Caenorhabditis elegans Hypothetical
protein F19B6.2b protein.
Length = 336
Score = 28.3 bits (60), Expect = 7.2
Identities = 25/96 (26%), Positives = 37/96 (38%)
Frame = +2
Query: 158 ATGASERXPDSSRCVGHHESTGDARGSGENFTSAVHAGILARLSDSDQEDMKRQKYEMIS 337
A A PD+S +G + G + G+G+N TS V G RL + +
Sbjct: 205 AVTAKPPAPDASAFIGAGQKAGGSGGTGQNATS-VFGGAGRRLDGKKKPSSSVSLSDGTG 263
Query: 338 VVVCNLYPFVQTVSKXDVTVADAVENIDIGGVTLLR 445
V N P + V + E+ G V+ LR
Sbjct: 264 VSTSNAAPVANDLPAIPPVVVN--EDYKPGRVSFLR 297
>Z69635-3|CAA93460.1| 342|Caenorhabditis elegans Hypothetical
protein F19B6.2a protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.2
Identities = 25/96 (26%), Positives = 37/96 (38%)
Frame = +2
Query: 158 ATGASERXPDSSRCVGHHESTGDARGSGENFTSAVHAGILARLSDSDQEDMKRQKYEMIS 337
A A PD+S +G + G + G+G+N TS V G RL + +
Sbjct: 211 AVTAKPPAPDASAFIGAGQKAGGSGGTGQNATS-VFGGAGRRLDGKKKPSSSVSLSDGTG 269
Query: 338 VVVCNLYPFVQTVSKXDVTVADAVENIDIGGVTLLR 445
V N P + V + E+ G V+ LR
Sbjct: 270 VSTSNAAPVANDLPAIPPVVVN--EDYKPGRVSFLR 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,331,465
Number of Sequences: 27780
Number of extensions: 327955
Number of successful extensions: 820
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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