Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0188
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 100 2e-21
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 61 1e-09
SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10) 37 0.018
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 32 0.68
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 31 1.2
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 31 1.2
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 29 3.6
SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 29 3.6
SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15) 29 3.6
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 29 4.8
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 29 4.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 6.4
SB_35344| Best HMM Match : PRP1_N (HMM E-Value=0) 29 6.4
SB_28342| Best HMM Match : HAT (HMM E-Value=0.043) 29 6.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 29 6.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 6.4
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 28 8.4
SB_25083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 28 8.4
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 100 bits (239), Expect = 2e-21
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = +2
Query: 314 AARSKLIDKNLKENGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPV 493
A RSK+IDKNL+ +G +A++++KLLLLG ESGKSTIVKQMKIIHE G++ E+ QY+ V
Sbjct: 13 AERSKMIDKNLRADGERAAREVKLLLLGAGESGKSTIVKQMKIIHEHGYSTEECTQYKQV 72
Query: 494 VYSNTSSRSFAILRAMP----NFGH 556
VYSNT AI+RAM FGH
Sbjct: 73 VYSNTIQSMIAIIRAMGTLKIEFGH 97
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 100 bits (239), Expect = 2e-21
Identities = 60/125 (48%), Positives = 75/125 (60%)
Frame = +2
Query: 317 ARSKLIDKNLKENGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVV 496
ARSK I+KNLK G +A +D+KLLLLG ESGKSTIVKQM+IIH+ GF+ ED+ QYRP+V
Sbjct: 14 ARSKAIEKNLKLEGARAERDVKLLLLGAGESGKSTIVKQMRIIHDHGFSPEDYIQYRPLV 73
Query: 497 YSNTSSRSFAILRAMPNFGHHLWQ*RPRKPWXDGVXT*FNGWKDTEPFXEELLRRXXKGS 676
+SNT I+RAM ++ R V DTEPF EL +
Sbjct: 74 FSNTIYSLLTIIRAMDKLRID-FENDARLMDAKLVFDVIARADDTEPFTPELTESMER-L 131
Query: 677 WADSG 691
W D+G
Sbjct: 132 WKDAG 136
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 68.9 bits (161), Expect = 5e-12
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +2
Query: 332 IDKNLKENGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTS 511
I+K ++++ +++KLLLLG ESGKST +KQM+IIH G+++ED + Y P+VY N
Sbjct: 19 IEKQIRQDKRNQRRELKLLLLGTGESGKSTSIKQMRIIHGQGYSDEDKRGYIPLVYQNII 78
Query: 512 SRSFAILRAM 541
+ ++ RAM
Sbjct: 79 TAMHSLTRAM 88
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = +2
Query: 299 KSVQRAARSKLIDKNLKENGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFK 478
+ ++ A+S+ IDK + + Q + +K+LLLG ESGKST +KQM+II+ F + +
Sbjct: 219 EEAEQRAQSQKIDKQIAQEKAQLRRQVKILLLGAGESGKSTFLKQMRIIYGKDFDADALQ 278
Query: 479 QYRPVVYSN 505
+Y+PVVYSN
Sbjct: 279 EYKPVVYSN 287
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 61.3 bits (142), Expect = 1e-09
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +2
Query: 293 RPKSVQRA-ARSKLIDKNLKENGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNE 469
+P ++ A RS+ ID L + + S++I+LL L + SGKST +KQ+KI+++ GF +
Sbjct: 12 KPSELKAAFKRSQHIDALLDQERERKSQEIQLLTLVSGNSGKSTFIKQLKIVYDDGFNEK 71
Query: 470 DFKQYRPVVYSNTSSRSFAILRAMPNFGHH 559
+ +YRP VY + I RA+ G H
Sbjct: 72 ERLEYRPQVYRLLAGNIAKITRAVEQLGLH 101
>SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 413 KSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTSSRSFAILRAMPNFGHH 559
KST +KQ+KI+++ GF ++ +YRP VY + I RA+ G H
Sbjct: 2 KSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIAKITRAVEQLGLH 50
>SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10)
Length = 290
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 395 GNCESGKSTIVKQMKIIHE-SGFTNEDFKQYRPVVYSNTSSRSFAILRAM 541
G ESGKSTIVKQM+I+H+ GFT + +Q + N I AM
Sbjct: 156 GAGESGKSTIVKQMRILHDVHGFTELEKRQKIEDIKKNIRDAILTITGAM 205
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/60 (36%), Positives = 25/60 (41%)
Frame = -3
Query: 294 RLGAPHIGSSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT*QY 115
+L P I P P P EP +P AL + P P P P T P TRT QY
Sbjct: 31 KLAVPPIPHGPRPLP---PLREPPTPAPTPPPALPSTPTLPLAPRPRPTASQPTTRT-QY 86
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +1
Query: 499 QQYVQSLVRHLACHAQLWASSMAIETEKAXVRWCSNVIQRMEG 627
+QY+++ + HL + +++ +E ++ R C N +QRM G
Sbjct: 34 RQYIENTMTHLDAIDDPFMTTIGLEDDEPMCRICQNTVQRMIG 76
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 276 IGSSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 130
I SP P A+P P P A+ P H + + P A P P + AP T
Sbjct: 336 IPPSPNRSPAASPAPSPSAVKPF--HPVSSAPSAIKFPAKP-NVPAPGT 381
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 288 GAPHIGSSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPN 133
G PH+GSSP P +PT +P++ H AP+ EP +P+
Sbjct: 778 GNPHMGSSP--APIPSPTSTGSPQTPLTPHTPRFPNTAPSPGEPNKPPFSPS 827
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 264 PYARPQAAPTPEPGALSPISQHALYTRPVAPAL 166
P P + PTP P P LYT P A A+
Sbjct: 146 PPLAPSSGPTPSPPPTKPQEDPTLYTEPCANAV 178
>SB_8164| Best HMM Match : rve (HMM E-Value=0.00069)
Length = 1117
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 232 RAGRALTDLSACALHASCRSGTTGATLHDISTQYTN 125
R GR L L+ ALH + T GA+ H+++TQ N
Sbjct: 553 RCGR-LMSLALGALHVARHVNTNGASTHELATQMRN 587
>SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15)
Length = 794
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -3
Query: 291 LGAPHIGSSPYARPQAAPTPEPG--ALSPISQHALYTRPVAPALPEPPYTILAPNTR 127
+G P GS P Q PE +L P+S H+++ P++ PP ++ P+ R
Sbjct: 593 MGLPRRGSLP----QVGSYPEGSFPSLPPVSSHSMFQHQPHPSMACPPTMMVTPDGR 645
>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 362 QASKDIKLLLLGNCESGKSTIV 427
Q DI++ +LGN ESGKST++
Sbjct: 108 QQFTDIRMAVLGNVESGKSTLL 129
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -3
Query: 282 PH-IGSSPYARPQAAPTPEPGALSPISQHALYTRPVA--PALPEPPYTILAP 136
PH I SSP P + P P A P + P A PA P PP + AP
Sbjct: 43 PHFISSSPPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAP 94
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 270 SSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPE 160
SSP+A P +PT P SP +++ R P LP+
Sbjct: 354 SSPFASPTGSPTSSPVG-SPAQSPSVFRRIPPPPLPD 389
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 273 GSSPYARPQA-APTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT*QY 115
G S A P P P PG +P + +P P PP L P + Y
Sbjct: 111 GPSGMATPGTFIPPPPPGVFTPPPPYRTTAKPKGPTKKPPPMMSLTPTPKKKHY 164
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 246 AAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 130
AAP L + Q A VAP P+ P T LAP T
Sbjct: 178 AAPVTTMKLLLCLRQQAASETTVAPETPDAPATTLAPET 216
>SB_35344| Best HMM Match : PRP1_N (HMM E-Value=0)
Length = 437
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 454 WIHK*RLQTVPARGLQQYVQSLVRHLACHAQLWASSMAIETE 579
W+ RLQ P ++ V VR L +LW + A+ETE
Sbjct: 348 WLEAVRLQ--PPDAMKAVVAQAVRQLPQSVRLWIKAAAVETE 387
>SB_28342| Best HMM Match : HAT (HMM E-Value=0.043)
Length = 758
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 454 WIHK*RLQTVPARGLQQYVQSLVRHLACHAQLWASSMAIETE 579
W+ RLQ P ++ V VR L +LW + A+ETE
Sbjct: 89 WLEAVRLQ--PPDAMKAVVAQAVRQLPQSVRLWIKAAAVETE 128
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 270 SSPYARPQAAP-TPEPGALSPISQHALYTRPVAPALPEPPY 151
++PY P P P P A P S +A Y P P P P Y
Sbjct: 121 NAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLY 161
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 264 PYARPQAAP-TPEPGALSPISQHALYTRPVAPALPEPP 154
PY P AP P P A P + Y P+ P P PP
Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 413 KSTIVKQMKIIHESGFTNEDFKQYRPVV 496
KS I + +H SG +E FKQYR V
Sbjct: 997 KSLIASRQAALHNSGKESEAFKQYRNAV 1024
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 252 PQAAPTPEPGALSPISQHALYTRPVAPALPEPP 154
P AP+P P SP ++ P+APA PP
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPP 152
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 264 PYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAP 136
P+ARPQ P P P Q + Y +P AP + +P AP
Sbjct: 885 PFARPQQPPAP-----MPPQQQSPY-QPPAPTMQQPQLQAFAP 921
>SB_25083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 572 SIAIDDAQSWAWHARWRTSDWTYCCRP 492
++ ID + W RW T D CCRP
Sbjct: 67 ALRIDPQRIWKTPWRWFTEDLLDCCRP 93
>SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 456 PLSWIIFICLTIVLLPDSQLPNNNSLMSFDA*IPFSFKF 340
PL W I C T+ LLP+ L N L D IP F+F
Sbjct: 726 PLKWKI--CDTVGLLPNCGLSLNELLYMVDGNIPNRFQF 762
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 386 LLLGNCESGKSTIVKQMKIIHESGFTNE 469
+L G E GK I+KQ+K+ + GF N+
Sbjct: 421 ILQGEYEWGKGEILKQLKLAVKDGFLNQ 448
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 264 PYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT 124
P RP P P P+S + + +AP L P TI AP T
Sbjct: 388 PRHRPAQRPLPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTT 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,024,335
Number of Sequences: 59808
Number of extensions: 559529
Number of successful extensions: 2373
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2364
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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