Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0188
(854 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26300.1 68415.m03156 guanine nucleotide binding protein (G-p... 54 2e-07
At1g31930.2 68414.m03924 extra-large guanine nucleotide binding ... 38 0.009
At1g31930.1 68414.m03923 extra-large guanine nucleotide binding ... 38 0.009
At4g34390.1 68417.m04885 extra-large guanine nucleotide binding ... 35 0.079
At2g23460.1 68415.m02801 extra-large guanine nucleotide binding ... 34 0.10
At5g26070.1 68418.m03102 hydroxyproline-rich glycoprotein family... 32 0.56
At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 30 1.7
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 30 1.7
At3g28790.1 68416.m03593 expressed protein 30 2.3
At1g33700.1 68414.m04167 expressed protein contains Pfam domain ... 30 2.3
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 29 3.9
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 3.9
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 5.2
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 5.2
At4g10060.1 68417.m01645 expressed protein contains Pfam domain ... 28 6.9
At3g51290.1 68416.m05614 proline-rich family protein 28 6.9
At2g43440.1 68415.m05399 F-box family protein contains Pfam PF00... 28 6.9
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 6.9
At2g09865.1 68415.m01022 hypothetical protein 28 6.9
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 28 6.9
At5g51300.2 68418.m06360 splicing factor-related contains simila... 28 9.1
At5g51300.1 68418.m06359 splicing factor-related contains simila... 28 9.1
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 28 9.1
At4g10740.1 68417.m01754 F-box family protein contains Pfam PF00... 28 9.1
At2g46820.1 68415.m05842 expressed protein 28 9.1
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 9.1
>At2g26300.1 68415.m03156 guanine nucleotide binding protein
(G-protein) alpha-1 subunit / GP-alpha-1 (GPA1)
identical to SP|P18064 Guanine nucleotide-binding
protein alpha-1 subunit (GP-alpha-1) {Arabidopsis
thaliana}
Length = 383
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 ENGIQASKDI-KLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSN 505
E +A K I KLLLLG ESGKSTI KQ+K++ ++GF + K Y PV+++N
Sbjct: 29 EQEAKAEKHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHAN 81
>At1g31930.2 68414.m03924 extra-large guanine nucleotide binding
protein, putative / G-protein, putative similar to
extra-large G-protein (XLG) [Arabidopsis thaliana]
GI:3201680; contains Pfam profile PF00503: G-protein
alpha subunit
Length = 848
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 353 NGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSN 505
N I+ K KLLLLG SG STI KQ K ++ + F+ E+ + + +V SN
Sbjct: 423 NYIEHKKIQKLLLLGIEGSGTSTIFKQAKFLYGNKFSVEELQDIKLMVQSN 473
>At1g31930.1 68414.m03923 extra-large guanine nucleotide binding
protein, putative / G-protein, putative similar to
extra-large G-protein (XLG) [Arabidopsis thaliana]
GI:3201680; contains Pfam profile PF00503: G-protein
alpha subunit
Length = 848
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 353 NGIQASKDIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSN 505
N I+ K KLLLLG SG STI KQ K ++ + F+ E+ + + +V SN
Sbjct: 423 NYIEHKKIQKLLLLGIEGSGTSTIFKQAKFLYGNKFSVEELQDIKLMVQSN 473
>At4g34390.1 68417.m04885 extra-large guanine nucleotide binding
protein, putative / G-protein, putative similar to
extra-large G-protein (XLG) [Arabidopsis thaliana]
GI:3201680; contains Pfam profile PF00503: G-protein
alpha subunit
Length = 861
Score = 34.7 bits (76), Expect = 0.079
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +2
Query: 380 KLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTSSRSFAILRAMPNF 550
KLLL+G+ + G +TI KQ + ++ F+ ED ++ + ++ +N + +L A F
Sbjct: 464 KLLLIGSEKGGATTIYKQARSLYNVSFSLEDRERIKFIIQTNLYTYLAMVLEAHERF 520
>At2g23460.1 68415.m02801 extra-large guanine nucleotide binding
protein / G-protein (XLG) identical to extra-large
G-protein (XLG) [Arabidopsis thaliana] GI:3201680
Length = 888
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 287 PSRPKSVQRAARSKLIDKNLKE--NGIQASKDIKLLLLGNCESGKSTIVKQMKIIHES-G 457
P KS A+ +L N + + ++ K+LL+GN SG STI KQ KI+++
Sbjct: 452 PVPSKSTANASGEQLYSANSRSILDHLEHRTLQKILLVGNSGSGTSTIFKQAKILYKDVP 511
Query: 458 FTNEDFKQYRPVVYSN 505
F ++ + + ++ +N
Sbjct: 512 FLEDERENIKVIIQTN 527
>At5g26070.1 68418.m03102 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; similar to root nodule extensin
[Pisum sativum] gi|15021750|gb|AAK77902; Common family
members: At5g19800, At5g57070, At1g72790 [Arabidopsis
thaliana]
Length = 102
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = -3
Query: 360 IPFSFKFLSINLLRAARCTLFGRLGAPHIGSSPYARPQAAPTPEPGALSPISQHALYTRP 181
+ F+ FL L A +L P P +P P L P H Y+RP
Sbjct: 6 LSFTLVFLLAILFTVAEANNNRKLLKTPTNYQPLYSPSPSPYRSPVTLPPPPPHPAYSRP 65
Query: 180 VA--PALPEP 157
VA P LP P
Sbjct: 66 VALPPTLPIP 75
>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
similar to SP|Q01205 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 279 HIGSSPYARPQAAPTPEPGALSP-ISQHALYTRPVAPALPEPP 154
H+ S A + AP P P A P + + +P AP+ P PP
Sbjct: 176 HVAPSEKAPEKPAPKPSPPAEKPKVESTKVAEKPKAPSPPPPP 218
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 285 APHIGSSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAP 136
AP++ SSP P +P+P+ SP + + P P P P +P
Sbjct: 230 APYVYSSPPPPPYYSPSPKVNYKSPPPPYVYSSPPPPPYSPSPKVEFKSP 279
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 273 GSSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 130
GSS A P +PTP P +P + P P P + AP+T
Sbjct: 268 GSSSGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPST 315
>At1g33700.1 68414.m04167 expressed protein contains Pfam domain
PF04685: Protein of unknown function, DUF608
Length = 947
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 365 PEYHSLSSSYRSICFEQPAARSSADWAH 282
PE + + YRS+C+ +P A WAH
Sbjct: 857 PEAWTTNDEYRSLCYMRPLAIWGIQWAH 884
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -3
Query: 288 GAPHIGSSPYARP-QAAPTPEPGALSPISQHALY------TRPVAPALPEPPY 151
GAP G SP +RP A PG P+SQ A + RP P +P +
Sbjct: 76 GAPQRGPSPMSRPGPPAGMARPGGPPPVSQPAGFQSNVPLNRPTGPPSRQPSF 128
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 267 SPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAP 136
SP P +P P P SP +Y+ P P + PP + +P
Sbjct: 509 SPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSP 552
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 258 ARPQAAPTPEPGALSPISQHALYTRPV-APALPEP 157
A+P A+P P A++P S A PV +PA P P
Sbjct: 64 AQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPP 98
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -3
Query: 285 APHIGSSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAP 136
AP + P + P A +P P SP A + P APA P PP + P
Sbjct: 108 APTVSPPPVSPPPAPTSPPPTPASPPPAPA--SPPPAPASP-PPAPVSPP 154
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 270 SSPYARPQAAPTPEPGALSPISQHALYTRPVAPALPEP---PYTILAPNTRT*QY 115
S P + P +AP P +LSP S L P +P P P P + L+P++ + Y
Sbjct: 88 SPPSSSPSSAP---PSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSSSSSTY 139
>At4g10060.1 68417.m01645 expressed protein contains Pfam domain
PF04685: Protein of unknown function, DUF608
Length = 912
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 365 PEYHSLSSSYRSICFEQPAARSSADWA 285
PE +++ YRS+C+ +P A + WA
Sbjct: 820 PEAWNMNDEYRSLCYMRPLAIWAIQWA 846
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 279 HIGSSPYARPQAAPTPEPGALSPISQHALY-TRPVAPALPEPP 154
H SP P P P P LSP S+ + T + LP PP
Sbjct: 66 HNPPSPSPPPPPPPRPPPPPLSPGSETTTWTTTTTSSVLPPPP 108
>At2g43440.1 68415.m05399 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 791
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 584 AFSVSIAIDDAQSWAWHARWRTSDW 510
++S+S+A SW W RW T W
Sbjct: 281 SYSISLAHGVGFSWPWQKRWFTPVW 305
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 300 FGRLGAPHIGSSPYARPQAAPTPEPGALSPISQHA--LYTRPVAPALPEPPYTILAP 136
+G+ P+ +PY P + P P P P +Q++ Y P P PPY P
Sbjct: 12 YGQYPYPYPYPAPYRPPSSEPYPPP----PTNQYSAPYYPYPPPPYATPPPYASPPP 64
>At2g09865.1 68415.m01022 hypothetical protein
Length = 339
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 291 LGAPHIGSSPYARPQAAPTPEPGALSP 211
+G P +GSS A P P+P P + P
Sbjct: 266 VGGPRVGSSSLALPYELPSPTPIPIEP 292
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 615 TDGRTPNRSXRSFFAAXKKVL-GPTLAVQGXPWVRFPTGYPTPTNFPLKL 761
TD +T + R F+ + ++ GPTL VQ +PT P N P ++
Sbjct: 466 TDMKTSEDTMRGFYGSHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEV 515
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 264 PYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 154
P P A P P PG+ P+ H + P P PP
Sbjct: 610 PSYSPYALPPPPPGSYHPV--HGQHMPPYGMQYPPPP 644
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 264 PYARPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 154
P P A P P PG+ P+ H + P P PP
Sbjct: 610 PSYSPYALPPPPPGSYHPV--HGQHMPPYGMQYPPPP 644
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -3
Query: 282 PHIGSSPYARP-QAAPTPEPGALSPISQHALYTRPVAPA--LPEPPYTILAP 136
P + SP P +P P P LSP L + P P P PP +L+P
Sbjct: 101 PPVNLSPPPPPVNLSPPPPPVLLSPPPPPVLLSPPPPPVNLSPPPPPVLLSP 152
>At4g10740.1 68417.m01754 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
protein interaction domain
Length = 427
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 374 DIKLLLLGNCESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTSSRSFAILRAMPNFG 553
D K+++L N G++ ++ K S + D Y +N+ +RS ILR + +F
Sbjct: 120 DTKIVVL-NPYLGQTRWIQTRKYHRTSEWEGRDVYNYALRYETNSGNRSPKILRFIDDFH 178
Query: 554 HH 559
HH
Sbjct: 179 HH 180
>At2g46820.1 68415.m05842 expressed protein
Length = 174
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 444 SMKVDSQMKTSNSTGPWSTAIRPVARSPSCVPCPTLGI 557
S+ V S +S P S A SPSC+ PTL I
Sbjct: 3 SLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPI 40
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 285 APHIGSSPYARPQAAPTPEPGALSPISQ 202
+P + ++P A P+A+ P P A +P++Q
Sbjct: 587 SPPVSTTPSAVPEASTIPSPPAPAPVAQ 614
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,944,774
Number of Sequences: 28952
Number of extensions: 376816
Number of successful extensions: 1373
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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